EY666303

Overview
NameEY666303
Unique NameEY666303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.164e-89
Identity = 163/220 (74.09%), Postives = 188/220 (85.45%), Query Frame = 2
Query:   53 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 706
            M+VS N  L+QPSLS  C++KL+SGLK QS S   +G  NL+ EFYGRV+KSL SG    K  R R+ MMPIGTP+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+R+Y+Y+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RD
Sbjct:    1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRD 218          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.125e-45
Identity = 90/150 (60.00%), Postives = 108/150 (72.00%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 703
            MPIG PKV YR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D  K + LYIN PGG VT  +AIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+LRVR
Sbjct:    1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRVR 150          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44
Identity = 89/162 (54.94%), Postives = 111/162 (68.52%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGNRS 739
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +YLYIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+LR+R   ++    N S
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTS 162          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.725e-44
Identity = 88/160 (55.00%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGN 733
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +YLYIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+LR+R   ++    N
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANN 160          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.985e-42
Identity = 80/150 (53.33%), Postives = 113/150 (75.33%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 703
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ + SK +Y+YIN PGG VT  +A+YDTM  +K+ V T CVG A  +A F+LAGG +G R A+P SRI +  P G +RGQA ++ +E++E++R+R
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEVMRIR 150          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP_CHLVU (ATP-dependent Clp protease proteolytic subunit OS=Chlorella vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.543e-42
Identity = 88/187 (47.06%), Postives = 125/187 (66.84%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGNR-STL*ENTRDL-RGLTLWVREVLKWG 808
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++  MLYL++ + +K +Y+YIN PGG VT  +A+YD M  +KS V T CVG A  +A F+LAGG++G R A+P SRI +  P G ++GQA ++ +E+ E++R+R    R        TL   +RD+ R   L  RE  ++G
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEGGSQGQASEVLSESQEVMRIRRQVGRIYSERTGQTLSRVSRDMDRDQFLSAREAKEYG 187          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP_PSEAK (ATP-dependent Clp protease proteolytic subunit OS=Pseudendoclonium akinetum GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 706
            MPIG PKV YR  G    +WVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ D SK +Y+YIN PGG VT  + ++D M  +KS V T CVG A  +A F+LAGG KG R A+P SRI +  P G ++GQA  + +E++E+LR+RD
Sbjct:    1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKSKGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPHSRIMIHQPEGGSQGQASVVLSESEEVLRIRD 151          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 79/155 (50.97%), Postives = 108/155 (69.68%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSR 718
            MPIG PKV YR PG G  QW+D++N L  +R+IF+G+ +D+E +N I+A+MLYLDS D  K ++LYIN PGG V+  LAIYDTMQ +++ V T CVG A  +  FLL  G KG R+++P SRI +  P G A+GQA DI  +A E+L  +D  ++
Sbjct:    1 MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQ 154          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVR 703
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK +YLYIN PGG VT  +AIYDTMQ +KSPV T C+G A  +  FLL  G KG R A+P SRI +  P  G  R QA DI  EA E+LR++
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIK 151          
BLAST of EY666303 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 2
Query:  254 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVR 703
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK +YLYIN PGG VT  +AIYDTMQ +KSPV T C+G A  +  FLL  G KG R A+P SRI +  P  G  R QA DI  EA E+LR++
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIK 151          
The following BLAST results are available for this feature:
BLAST of EY666303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH2.164e-8974.09ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_THEEB1.125e-4560.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANASP1.624e-4454.94Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP2_ANAVT4.725e-4455.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_OLTVI1.985e-4253.33ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLVU7.543e-4247.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PSEAK4.139e-4051.66ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_GLOVI9.221e-4050.97ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP3_SYNE74.576e-3952.98ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNP64.576e-3952.98ATP-dependent Clp protease proteolytic subunit 2 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-021-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666303 ID=EY666303; Name=EY666303; organism=Citrus sinensis; type=EST; length=856bp
CCACGCGTCCGAACTGACCAAACCAGTTGCAGTTCACTCTCTCGCGCTAA
ACATGTCCGTTTCGCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGT
AACCTCAAGCTTTTTTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGG
AACTGGGAAACCTAATTTGAGTGCTGAATTCTATGGCAGAGTTCATAAGA
GCCTCTACTCCGGCATTCGTAATGATAAACCAATAAGGGGACGAATTGCA
ATGATGCCGATTGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGG
ATCTTGGCAATGGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTA
TTTTCATTGGGCAAAATATAGATGAAGAATTTAGCAACCAAATATTGGCA
ACGATGTTGTATCTAGACAGTGTTGATGATTCCAAAAGGGTTTATTTGTA
CATCAATGGTCCCGGTGGGGATGTTACTCCCACCTTGGCAATTTACGACA
CTATGCAGAGCTTGAAGAGTCCTGTTGGCACTCACTGTGTGGGCTTTGCC
TATCATTTAGCAGGGTTTCTTCTAGCAGGTGGAGAAAAGGGTAATCGGTC
TGCAATGCCTCTTTCGAGAATTGCTTTAGACTCTCCAGCTGGTGCAGCTC
GTGGTCAGGCTGATGACATTCGTAATGAAGCAGATGAGCTTCTTAGAGTC
AGAGATACATTTTCAAGGAGTTGTCTAGGAAACAGGTCCACCCTTTGAGA
GAATACGAGGGATTTAAGAGGATTAACGCTTTGGGTCCGGGAGGTCTTGA
AATGGGGTGAAAATGGATATCAGGCCCCTCCGATAAGAAAATAACCCCGA
AAGAGT
back to top