EY666280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 2.907e-90 Identity = 170/229 (74.24%), Postives = 187/229 (81.66%), Query Frame = 3 Query: 60 AATSGAVLNGLGSSFINGGKKSQALLAG--TNRVTXXXXXXXXXXLPP--KKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGGKVF*SL-MAGWEN*GWCLHSWNLKSLRRLKVAEKK 731 A TS AVLNGL SSF+ GG KSQALLA RV L KKSWIPAV+GGGNL++PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMG VESKRWVDFF+P+SQS+EWATPWS+TAENFAN TGE+GYPGGK F L +AG N G ++ + + L RLKVAE K Sbjct: 2 ATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNG--VYVPDTEKLERLKVAEIK 228
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 2.461e-89 Identity = 168/230 (73.04%), Postives = 188/230 (81.74%), Query Frame = 3 Query: 54 MAAATSGAVLNGLGSSFINGGKKSQALLAG--TNRVTXXXXXXXXXX-LPPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGGKVF*SL-MAGWEN*GWCLHSWNLKSLRRLKVAEKK 731 M ++ AVLNGL SSF+ GGKK+QALL T RVT + PKKSWIPAVK GGNL++PEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMG VESKRWVDFF+ +SQSI+WATPWS+TAENFAN TGE+GYPGGK F L +AG N G ++ + + L RLK+AE K Sbjct: 1 MTTTSATAVLNGLSSSFLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNG--VYVPDTEKLERLKLAEIK 228
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 8.754e-87 Identity = 163/235 (69.36%), Postives = 189/235 (80.43%), Query Frame = 3 Query: 54 MAAATSG-AVLNGLGSSFINGGKKS-QALLAGTNRV------TXXXXXXXXXXLPPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGGKVF*SL-MAGWEN*GWCLHSWNLKSLRRLKVAEKK 731 MAAATS A++NG S F++GGKKS Q+LL ++V T PKKSWIPAVKGGGN ++PEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMG VESKRWVDFF+P+SQS+EWATPWSRTAENF+N TGE+GYPGGK F L +AG + G +++ + L RLK+AE K Sbjct: 1 MAAATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNG--VYNPDTDKLERLKLAEIK 233
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.550e-22 Identity = 64/162 (39.51%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 192 PPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGGKVF*SLMAGW 659 P + W P PEWLDGSLPGD+GFDPLGLG DP LKW +AEL+H RWAM GIF+ + + I W+ AG +L +L+L+G E +RW D P + + P N GT + GYPGG F L GW Sbjct: 63 PDRPLWFPGSTP------PEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFP-----NNKLTGT-DVGYPGGLWFDPL--GW 207
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.747e-21 Identity = 69/213 (32.39%), Postives = 98/213 (46.01%), Query Frame = 3 Query: 39 VEIISMAAATSGAVLNGLGSSFINGGKKSQALLAGTNRVTXXXXXXXXXXLPPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGGKVF*SLMAGW 659 V S ++ +G+++ +SF+ GG++ + T P + W P P WLDGSLPGD+GFDPLGL DP L+W ++AEL+H RWAM GIF+ + + I W+ AG +L +L+L+G E +RW D P + + P N GT + GYPGG F L GW Sbjct: 13 VAFSSPSSRRNGSIVGTTKASFL-GGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTP------PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFT---DTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFP-----NNKLTGT-DVGYPGGLWFDPL--GW 207
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.020e-18 Identity = 55/150 (36.67%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 198 KKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGG 629 K W+P L +P +L GSLPGD GFDPLGL +DP L+W+ +AEL++GRWAM V G+ + + ++ I W+ AG + S +L + +L VE +RW D NP S + + + ++ GE GYPGG Sbjct: 53 KGEWLPG------LASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFA---SSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPAGEVGYPGG 187
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.020e-18 Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 198 KKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPGG 629 K W+P L +P++L GSL GD GFDPLGL +DP LKW+ +AEL++GRWAM V G+ + + ++ I W++AG + S +L + +L VE +RW D NP S + + + ++ GE GYPGG Sbjct: 54 KGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPKGEVGYPGG 188
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13 Identity = 48/102 (47.06%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 246 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGSL---LGTQLLLMGCVESKR 518 P +LDGS PGD+GFD LGLG+ PA L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +G+L L + L + VE +R Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.202e-13 Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 198 KKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAG---ADPGAIAPFSFGSLLGTQLLLMGCVESKRWVDFFNPESQSIEWATPWSRTAENFANGTGEKGYPG 626 K SW+P ++ +P +LDGSL GD GFDPL L +DP L+W+ +A++++GRWAM V G+ + + + A PG F+ S + VE +RW D NP S + + ++++ E GYPG Sbjct: 33 KGSWLPGLQ------SPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQD------PIFKSYSLPPHECGYPG 166
BLAST of EY666280 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.263e-13 Identity = 48/155 (30.97%), Postives = 68/155 (43.87%), Query Frame = 3 Query: 207 WIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGSLLGTQLLLMGCVESKR 518 W P K +PE+LDGSL GDYGFDP GLGK +L++ +RE ELIHGRWAM A +G + +G+ W +AG + G PFS +L+ ++L++G +E +R Sbjct: 55 WFPGAK------SPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR 203 HSP 2 Score: 22.3274 bits (46), Expect = 2.263e-13 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 628 GKFFDPLWLA 657 GKFFDPL LA Sbjct: 217 GKFFDPLGLA 226 The following BLAST results are available for this feature:
BLAST of EY666280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666280 ID=EY666280; Name=EY666280; organism=Citrus sinensis; type=EST; length=934bpback to top |