EY666263
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY666263 vs. ExPASy Swiss-Prot
Match: UBP27_ARATH (Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana GN=UBP27 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.534e-50 Identity = 110/191 (57.59%), Postives = 137/191 (71.73%), Query Frame = 1 Query: 109 LVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECE-----EPDEDLPLTVALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESS-LVDAFEAASCRILS-LKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSPM 660 LVPGLQNLGNNCFLNVILQALASC F FLQ V+ + E +E LPLT AL++LL+EL VG R V +P+KVM+ + Y +NFNLTSQQDA EA LHL+SSL+EE + Y P++SS L D + + R+L+ + E KRW KH GPFDGILGS L C++C SQISL++QFFH+LPLSP+ Sbjct: 72 LVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALLQELGTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQEEIVVCYRPSQSSNLSDILFSRNLRMLAPSEGLHGLMELKRWHKHLRGPFDGILGSTLMCRTCSSQISLEFQFFHTLPLSPL 262
BLAST of EY666263 vs. ExPASy Swiss-Prot
Match: UBP30_DANRE (Ubiquitin carboxyl-terminal hydrolase 30 OS=Danio rerio GN=usp30 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.733e-14 Identity = 65/207 (31.40%), Postives = 96/207 (46.38%), Query Frame = 1 Query: 70 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQ----KVMGECEEPDEDLPLTVALASLLEELCL--VGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVD------AFEAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLS 654 W + R ++ +VPGL NLGN CF+N +LQ LA+C F+ +L+ + + E + + L+ +L LL+ L GE VL ++ A+ LY + + +QDA E F L SSL EE + P + L D + E+ I + WR PF G L S + C+ C Q + Y F SL LS Sbjct: 49 WGPISDRRKKRKGMVPGLLNLGNTCFMNSLLQGLAACPSFIRWLEDFTSQNSADRERTERETQLSRSLMQLLKALSSHDPGEDD-VLDAGGLLEALRLYRWHISSFEEQDAHELFHVLTSSLEEE--QERQPRVAHLFDMQTLEKSVESKEKNISCRSGGPLHPIPSLWRTRH--PFHGRLTSYMACKRCEQQSPVHYDSFDSLSLS 250
BLAST of EY666263 vs. ExPASy Swiss-Prot
Match: UBP30_HUMAN (Ubiquitin carboxyl-terminal hydrolase 30 OS=Homo sapiens GN=USP30 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.148e-13 Identity = 62/214 (28.97%), Postives = 92/214 (42.99%), Query Frame = 1 Query: 70 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGEC----EEPDEDLPLTVALASLLEEL-CLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAF------EAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSPMPG*WFH 678 W E + + LVPGL NLGN CF+N +LQ L++C F+ +L++ + +EP L++ L LL+ L C VL ++ + +Y + +QDA E F + SSL +E P + L D E +I R W+ PF G L S + C+ C Q + + F SL LS W H Sbjct: 53 WGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPSHQYLSLTLLHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDE--RDRQPRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQH--PFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGH 262
BLAST of EY666263 vs. ExPASy Swiss-Prot
Match: UBP30_XENTR (Ubiquitin carboxyl-terminal hydrolase 30 OS=Xenopus tropicalis GN=usp30 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.500e-13 Identity = 66/219 (30.14%), Postives = 98/219 (44.75%), Query Frame = 1 Query: 109 LVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPD---EDLPLTVALASLLEELC-LVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVD----AFEAASCRILSLKRR-EVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSPMPG*WFHYSIWMHTGRLPKAVSHWPTT 738 LVPGL NLGN CF+N +LQ LASC F+ +L + + + E L+V L LL+ LC G VL ++ + + + +QDA E F L SSL +E P+ + L D F R + + + + +W+ PF G L S + C+ C Q + Y F SL LS + W H L + + H+ +T Sbjct: 83 LVPGLLNLGNTCFMNSLLQGLASCPSFIRWLADFTSKYRQENNTTEHQHLSVTLLHLLKALCNQEGTEDEVLDASPLLEVLRAHRWQISSFEEQDAHELFHVLTSSLEDE--RDRRPHVTHLFDLDSLEFPLEPQRQIHCRTQVPIYPIPSQWKSQH--PFHGRLTSNMVCKHCQHQSPMRYDTFDSLSLS------IPVATWGHPITLDQCLQHFIST 291
BLAST of EY666263 vs. ExPASy Swiss-Prot
Match: UBP30_MOUSE (Ubiquitin carboxyl-terminal hydrolase 30 OS=Mus musculus GN=Usp30 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.700e-13 Identity = 61/214 (28.50%), Postives = 93/214 (43.46%), Query Frame = 1 Query: 70 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGEC----EEPDEDLPLTVALASLLEEL-CLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAF------EAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSPMPG*WFH 678 W E + + LVPGL NLGN CF+N +LQ L++C F+ +L++ + + P L++ L +LL+ L C VL ++ + +Y + +QDA E F + SSL +E P + L D E A ++ R W+ PF G L S + C+ C Q + + F SL LS W H Sbjct: 53 WGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFVKWLEEFTTQYSRDQQGPHTHQCLSLTLLNLLKALSCQEVTEDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDE--RDRQPRVTHLFDVHSLEQQSEMAPRQVTCHTRGSPHPTTNHWKSQH--PFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGH 262 The following BLAST results are available for this feature:
BLAST of EY666263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY666263 ID=EY666263; Name=EY666263; organism=Citrus sinensis; type=EST; length=863bpback to top |