EY666259

Overview
NameEY666259
Unique NameEY666259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND1_RAT (Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus GN=Cand1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.208e-33
Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSGGVA-KQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIG 662
            +IA SPL IDL  VL   +  L +FLRK  RAL+  TL  ++ L+  Y D + A+  + ++ EL  LIS+SD+H++ +A+    TL    +  P+    +   +L + + L++S LLQG AL A+  FF ALV +                    QS  +  KQ+ YSIA+CVA L  A   +  +   + + D+ K+  ST+S +  LALL LGE+G
Sbjct:  634 LIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTL---AKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDV-KNSRSTDSIRL-LALLSLGEVG 846          

HSP 2 Score: 51.9878 bits (123), Expect = 3.208e-33
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 2
Query:  671 DLSSHEHIENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYPLSWTXSITAE--ETISLASSLKEVI 871
            DLS    +++VI+E+F SP EE KSAA YA G+I VGNL ++ P      IT++      L  SLKE+I
Sbjct:  850 DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV-LQEITSQPKRQYLLLHSLKEII 917          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND1_PONAB (Cullin-associated NEDD8-dissociated protein 1 OS=Pongo abelii GN=CAND1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.208e-33
Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSGGVA-KQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIG 662
            +IA SPL IDL  VL   +  L +FLRK  RAL+  TL  ++ L+  Y D + A+  + ++ EL  LIS+SD+H++ +A+    TL    +  P+    +   +L + + L++S LLQG AL A+  FF ALV +                    QS  +  KQ+ YSIA+CVA L  A   +  +   + + D+ K+  ST+S +  LALL LGE+G
Sbjct:  634 LIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTL---AKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDV-KNSRSTDSIRL-LALLSLGEVG 846          

HSP 2 Score: 51.9878 bits (123), Expect = 3.208e-33
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 2
Query:  671 DLSSHEHIENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYPLSWTXSITAE--ETISLASSLKEVI 871
            DLS    +++VI+E+F SP EE KSAA YA G+I VGNL ++ P      IT++      L  SLKE+I
Sbjct:  850 DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV-LQEITSQPKRQYLLLHSLKEII 917          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND1_MOUSE (Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus GN=Cand1 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.208e-33
Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSGGVA-KQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIG 662
            +IA SPL IDL  VL   +  L +FLRK  RAL+  TL  ++ L+  Y D + A+  + ++ EL  LIS+SD+H++ +A+    TL    +  P+    +   +L + + L++S LLQG AL A+  FF ALV +                    QS  +  KQ+ YSIA+CVA L  A   +  +   + + D+ K+  ST+S +  LALL LGE+G
Sbjct:  634 LIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTL---AKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDV-KNSRSTDSIRL-LALLSLGEVG 846          

HSP 2 Score: 51.9878 bits (123), Expect = 3.208e-33
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 2
Query:  671 DLSSHEHIENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYPLSWTXSITAE--ETISLASSLKEVI 871
            DLS    +++VI+E+F SP EE KSAA YA G+I VGNL ++ P      IT++      L  SLKE+I
Sbjct:  850 DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV-LQEITSQPKRQYLLLHSLKEII 917          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND1_HUMAN (Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens GN=CAND1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.208e-33
Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSGGVA-KQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIG 662
            +IA SPL IDL  VL   +  L +FLRK  RAL+  TL  ++ L+  Y D + A+  + ++ EL  LIS+SD+H++ +A+    TL    +  P+    +   +L + + L++S LLQG AL A+  FF ALV +                    QS  +  KQ+ YSIA+CVA L  A   +  +   + + D+ K+  ST+S +  LALL LGE+G
Sbjct:  634 LIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTL---AKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDV-KNSRSTDSIRL-LALLSLGEVG 846          

HSP 2 Score: 51.9878 bits (123), Expect = 3.208e-33
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 2
Query:  671 DLSSHEHIENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYPLSWTXSITAE--ETISLASSLKEVI 871
            DLS    +++VI+E+F SP EE KSAA YA G+I VGNL ++ P      IT++      L  SLKE+I
Sbjct:  850 DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV-LQEITSQPKRQYLLLHSLKEII 917          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND1_BOVIN (Cullin-associated NEDD8-dissociated protein 1 OS=Bos taurus GN=CAND1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.208e-33
Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSGGVA-KQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIG 662
            +IA SPL IDL  VL   +  L +FLRK  RAL+  TL  ++ L+  Y D + A+  + ++ EL  LIS+SD+H++ +A+    TL    +  P+    +   +L + + L++S LLQG AL A+  FF ALV +                    QS  +  KQ+ YSIA+CVA L  A   +  +   + + D+ K+  ST+S +  LALL LGE+G
Sbjct:  634 LIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTL---AKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDV-KNSRSTDSIRL-LALLSLGEVG 846          

HSP 2 Score: 51.9878 bits (123), Expect = 3.208e-33
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 2
Query:  671 DLSSHEHIENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYPLSWTXSITAE--ETISLASSLKEVI 871
            DLS    +++VI+E+F SP EE KSAA YA G+I VGNL ++ P      IT++      L  SLKE+I
Sbjct:  850 DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV-LQEITSQPKRQYLLLHSLKEII 917          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND2_MOUSE (Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus GN=Cand2 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.125e-24
Identity = 69/222 (31.08%), Postives = 110/222 (49.55%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSG----GVAKQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIGR 665
            ++A SPL +DL  +L   +  L +FLRK  RALR ATL  +++L  + G  +   A   ++ EL  L+S++D+H+  LA++   T+    ++ P+  + V   VL + L L+ S LL    L A + F  ALV +               A    Q G    G+ KQ  +S+A+CVA L  A   +   +  +++ D     SST    + LA L L E+G+
Sbjct:  635 LVAMSPLRLDLQPILAEALPILASFLRKNQRALRLATLAALDALAQSQGLGLPPPAVRTVLTELPALVSENDMHVAQLAVDFLTTV---TQTQPSSLVEVSGPVLGELLQLLHSPLLPAGVLAATEGFLQALVGTRPPCVEYSELISLLTAPVYNQVGDGGPGLHKQVFHSLARCVAALSAACPQEAAGTASRLVCDAKSPHSST--GVKVLAFLSLAEVGQ 851          

HSP 2 Score: 35.4242 bits (80), Expect = 2.125e-24
Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  692 IENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYP 802
            ++ V++E+  SP E+ ++AA YA G +  GNL  F P
Sbjct:  861 LKTVLLEALGSPSEDVRAAAAYALGRVGAGNLPDFLP 897          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND2_RAT (Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus GN=Cand2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.681e-24
Identity = 69/222 (31.08%), Postives = 109/222 (49.10%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSG----GVAKQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIGR 665
            ++A SPL +DL  +L   +  L +FLRK  RALR ATL  +++L  + G  +   A   ++ EL  L+S++D+H+  LA++   T+    ++ P   + V   VL + L L+ S LL    L A + F  ALV +               A    Q G    G+ KQ  +S+A+CVA L  A   +   +  +++ D     SST    + LA L L E+G+
Sbjct:  673 LVAVSPLRLDLQPILAEALPILASFLRKNQRALRLATLAALDALAQSQGLGLPPPAVRSVLAELPALVSENDMHVAQLAVDFLTTV---TQTQPASLVEVSGPVLEELLQLLHSPLLPAGVLAATEGFLQALVGTRPPCVEYSELISLLTAPVYNQVGDGGPGLHKQVFHSLARCVAALSAACPQEAAGTASRLVCDARSPHSST--GVKVLAFLSLAEVGQ 889          

HSP 2 Score: 35.4242 bits (80), Expect = 4.681e-24
Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  692 IENVIIESFQSPFEEDKSAAFYAXGNIPVGNLSKFYP 802
            ++ V++E+  SP E+ ++AA YA G +  GNL  F P
Sbjct:  899 LKTVLLEALGSPSEDVRAAAAYALGRVGAGNLPDFLP 935          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND1_DICDI (Cullin-associated NEDD8-dissociated protein 1 OS=Dictyostelium discoideum GN=cand1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.020e-23
Identity = 74/218 (33.94%), Postives = 113/218 (51.83%), Query Frame = 3
Query:   15 IAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQSGGVAKQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIGRR 668
            I  S ++IDL+ +L   I  L+ FLRK NR L+Q++L  +N +V    + + +S    I+ E++TLI++SDL +T LA      L+ +          V  K +P  LAL+KSSLLQG AL +L S FA +V                    +     V +Q+ +SI+QC+AV+ +         T+    +++ + SS N     L+L CLGEIGRR
Sbjct:  635 IINSSINIDLSSILPSAIKLLSTFLRKNNRVLKQSSLIALNDIVKVCPNLLPSSLLTGILTEMATLINESDLQITHLAFVFIQNLLKNYSEKHQAATLVNEKCIPPTLALLKSSLLQGVALESLLSLFATIVQLDEPGMKYEQLLTLLFNTAADIKQPVTRQSFHSISQCIAVITVNTTPALRKQTIH---NLICNLSSVNEPLVLLSLSCLGEIGRR 849          
BLAST of EY666259 vs. ExPASy Swiss-Prot
Match: CAND2_HUMAN (Cullin-associated NEDD8-dissociated protein 2 OS=Homo sapiens GN=CAND2 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.777e-21
Identity = 70/222 (31.53%), Postives = 113/222 (50.90%), Query Frame = 3
Query:   12 VIAASPLHIDLTCVLEHVIAELTAFLRKANRALRQATLGTMNSLVVAYGDKIGASAYEVIIVELSTLISDSDLHMTALALELCCTLMADKRSSPNVGLAVRNKVLPQALALIKSSLLQGQALVALQSFFAALVYSANXXXXXXXXXXXXXAKPSPQS----GGVAKQAMYSIAQCVAVLCLAAGDQKCSSTVKMLTDILKDDSSTNSAKQHLALLCLGEIGR 665
            ++A SPL +DL  +L   +  L +FLRK  RALR ATL  +++L  + G  +  SA + ++ EL  L+++SD+H+  LA++   T+    ++ P   + V   VL + L L++S LL    L A + F  ALV +               A    Q+     G+ KQ  +S+A+CVA L  A   +  S+  +++ D     SST    + LA L L E+G+
Sbjct:  636 LVAVSPLQLDLQPILAEALHILASFLRKNQRALRLATLAALDALAQSQGLSLPPSAVQAVLAELPALVNESDMHVAQLAVDFLATV---TQAQPASLVEVSGPVLSELLRLLRSPLLPAGVLAAAEGFLQALVGTRPPCVDYAKLISLLTAPVYEQAVDGGPGLHKQVFHSLARCVAALSAACPQEAASTASRLVCDARSPHSST--GVKVLAFLSLAEVGQ 852          
The following BLAST results are available for this feature:
BLAST of EY666259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CAND1_RAT3.208e-3335.32Cullin-associated NEDD8-dissociated protein 1 OS=R... [more]
CAND1_PONAB3.208e-3335.32Cullin-associated NEDD8-dissociated protein 1 OS=P... [more]
CAND1_MOUSE3.208e-3335.32Cullin-associated NEDD8-dissociated protein 1 OS=M... [more]
CAND1_HUMAN3.208e-3335.32Cullin-associated NEDD8-dissociated protein 1 OS=H... [more]
CAND1_BOVIN3.208e-3335.32Cullin-associated NEDD8-dissociated protein 1 OS=B... [more]
CAND2_MOUSE2.125e-2431.08Cullin-associated NEDD8-dissociated protein 2 OS=M... [more]
CAND2_RAT4.681e-2431.08Cullin-associated NEDD8-dissociated protein 2 OS=R... [more]
CAND1_DICDI1.020e-2333.94Cullin-associated NEDD8-dissociated protein 1 OS=D... [more]
CAND2_HUMAN2.777e-2131.53Cullin-associated NEDD8-dissociated protein 2 OS=H... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-015-H03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666259 ID=EY666259; Name=EY666259; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTCATTGCTGCCTCCCCACTCCATATAGATCTAACATGT
GTTTTAGAGCATGTAATTGCCGAATTGACTGCATTCCTGCGAAAGGCTAA
TCGAGCTCTGAGGCAGGCTACCTTGGGGACAATGAATTCCCTAGTTGTAG
CTTATGGTGATAAAATTGGTGCATCTGCTTATGAAGTTATCATCGTGGAA
CTTTCAACACTGATAAGTGACTCGGACTTGCATATGACTGCTCTTGCCTT
GGAACTTTGCTGTACCTTAATGGCTGATAAGAGGTCAAGCCCTAATGTTG
GTTTAGCTGTTAGGAATAAAGTTCTTCCTCAGGCTCTAGCTTTAATCAAA
AGCTCATTGCTGCAGGGTCAAGCACTCGTGGCTTTACAGAGCTTTTTTGC
TGCTTTAGTTTATTCTGCAAATACGAGTTTTGACACTCTGCTGGACTCTC
TTCTTTCAAGTGCTAAACCATCTCCACAGTCGGGTGGTGTTGCAAAACAG
GCTATGTACTCAATAGCCCAGTGCGTAGCTGTTCTCTGCCTGGCTGCTGG
TGATCAGAAGTGCTCATCCACTGTGAAGATGCTTACCGACATCCTTAAAG
ATGACAGCAGCACTAATTCTGCCAAGCAGCACCTTGCCTTGCTATGTCTG
GGGGAGATTGGGAGAAGAAAGATCTGAGCTCGCATGAGCATATAGAAAAT
GTTATTATCGAGTCTTTCCAGTCTCCTTTTGAAGAGGATAAGTCTGCCGC
TTTCTATGCTNCTGGGAACATACCCGTTGGTAATTTATCCAAGTTTTACC
CTTTATCCTGGACCNGATCGATAACCGCAGAAGAAACAATATCTCTTGCT
TCATCTCTTAAGGAAGTTATATAAGGGAATCTGGAAATAAACCAAATTCC
AGAATTCT
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