EY666248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.118e-49 Identity = 95/172 (55.23%), Postives = 123/172 (71.51%), Query Frame = 3 Query: 207 PTFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDS-GRKEVKSE 719 P+F F+ YM K +++AL+ A+P+Q P KIHE+MRYSLLAGGKR+RP LC+A+CELVGG++S+ MP ACA+EM HTMSLIHDDLP +DNDDLRRGK TNH VFGE FEH+A T S+ R+VRA+ EL A+G++G++ G D++S G EV E Sbjct: 75 PSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLE 246
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPP1_ARATH (Geranylgeranyl pyrophosphate synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=GGPS1 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 8.010e-48 Identity = 97/173 (56.07%), Postives = 121/173 (69.94%), Query Frame = 3 Query: 210 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGG--STDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEG 722 +F F Y+ +K+ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ES MP ACA+EM HTMSLIHDDLP +DNDDLRRGK TNH VFGE FEH+A+ T S RVVRA+ EL A+G++G++ G D+ S ++ G Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthetase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.046e-47 Identity = 97/178 (54.49%), Postives = 124/178 (69.66%), Query Frame = 3 Query: 192 VKIALPTFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGG-STDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEG 722 +K + +F F Y+ K+ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ESL MP CA+EM HTMSLIHDDLP +DNDDLRRGK TNH V+GE FEH+A+ T S RVVRA+ EL A+G++G++ G D+ S ++ + G Sbjct: 63 LKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVG 240
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.856e-47 Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 3 Query: 210 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDS 695 +F F+ YM K+ V+KAL++A+ ++ P KIHE+MRYSLLAGGKR+RP+LCIA+CEL GG ES+ MP ACA+EM HTMSL+HDDLP +DNDDLRRGK TNH VFGE FEH+A T G S++R+VR + EL +GS+G++ G D+ S Sbjct: 63 SFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCS 224
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.721e-45 Identity = 104/245 (42.45%), Postives = 141/245 (57.55%), Query Frame = 3 Query: 27 SALLKNSPLNY--FKMPFMIPFPNLKPFPMKN-----NACHAENLASVKPSQGAESIMNIKPVKIALPTFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEGNWSTIL 740 + L+ N L+Y F IP N K P N + +A+ K + E+ +P F F+ Y+T K+ V+KALDEA+ ++ P IHEAMRYSLLAGGKR+RP+LC+A+CELVGG++ M ACA+EM HTMSLIHDDLP +DNDDLRRGK TNH ++GE FEH+ T G + R+V A+ EL ++G++G++ G D +K GN S L Sbjct: 14 ACLVFNQTLSYKSFNGFMKIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEP-------FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVAD-------IKCTGNASVSL 244
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPP2_ARATH (Geranylgeranyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=GGPP2 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 1.414e-44 Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 210 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEG 722 TF+F+ YM SK+ V+KAL+EA+P+ P KIHEAMRY++LA GKR+RP+LC+ASCELVGG E+ MP ACA+EM HTMSLI DDLP +DNDDLRRGK T H V+GE FEH+ T S++R+V A+ EL ++G++G++ G + D+ S ++ G Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVG 250
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPP4_ARATH (Geranylgeranyl pyrophosphate synthetase 4 OS=Arabidopsis thaliana GN=GGPP4 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.548e-43 Identity = 86/171 (50.29%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 210 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEG 722 +F F+ YM SK+ +++ALDEA+P+ P IH+AMRY++LAGGKR+RP+LC+A+CELVGG+E L + ACA+EM HTMSLI DDLP +DNDDLRRGK T H VFGE FEH+ S+ ++VRA+ EL ++G+KG++ G + DL S E G Sbjct: 78 SFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT--EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVG 246
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPP3_ARATH (Geranylgeranyl pyrophosphate synthetase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.239e-40 Identity = 84/164 (51.22%), Postives = 110/164 (67.07%), Query Frame = 3 Query: 213 FQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGG-GSTDRVVRAITELGFALGSKGVLKGTSHDLDSGR 701 F F+ YM K+ V+ ALD ++P++ P + EA+RYSLLAGGKR+RP+LCIA CELVGGDE+ M ACA+EM HT SLIHDDLP +DN DLRRGK TNH V+GE FEH+ + G + +R++RA+ EL A+G+ G++ G DL S R Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASER 227
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 7.515e-38 Identity = 81/183 (44.26%), Postives = 117/183 (63.93%), Query Frame = 3 Query: 198 IALPTFQFEEYMTSKSRKVDKALDEALPM--------QHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTG-GGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSE 719 IA +F YM +K++ ++KALD ++P+ + ++H+AMRY+LL GGKR+RP+LC+ +CELVGG ES MP ACA+EM H SLI DDLP +D+D LRRGK TNH VFGE+T + A T G +++RV+RA+ E+ A+G++G++ G + DL R K+E Sbjct: 25 IASSDSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNE 207
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: CRTE_CYAPA (Geranylgeranyl pyrophosphate synthetase homolog OS=Cyanophora paradoxa GN=crtE PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.673e-35 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 213 FQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEGNWSTI 737 F Y+ + V+ L++++P +P I++++RYSL AGGKRIRP+LC+ASCEL GG + +P ACALEM HTMSLIHDDLPA+DND RRGK TNH ++GE FE +A +T D +V+ I ++ ++ + G++ G DL S E KS+ T+ Sbjct: 8 FNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSS---EGKSDTTLETL 179 The following BLAST results are available for this feature:
BLAST of EY666248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666248 ID=EY666248; Name=EY666248; organism=Citrus sinensis; type=EST; length=933bpback to top |