CX676184

Overview
NameCX676184
Unique NameCX676184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX676184 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = -2 
Query:  607 GKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 732
            GKQL QLLDEDP LM+RR +CAKRLELYK ARDEID+V+W R
Sbjct:  583 GKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAWVR 624
[Close]
BLAST of CX676184 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = -2 
Query:  607 GKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 732
            GK+L QLLDE+P LMERR QCAKRLELYK ARDEID+  W R
Sbjct:  571 GKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVWVR 612
The following BLAST results are available for this feature:
BLAST of CX676184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DRP1E_ARATH2.978e-1278.57Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH2.521e-1176.19Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_67G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-67G04-M7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676184 ID=CX676184; Name=CX676184; organism=Citrus sinensis; type=EST; length=889bp
TCGTTTCTAAAATTATTTGTCATGGATTCTATCTGAATTCTGTATATTCA
ATGTGTCTTTGTTTGGCCAGGACTCTGTTTCAGGAATCAAAGCGGGAGTA
GCAGCTGGTTTGCCCGTTGTCGGTCTAACCACAAGAAATCCTGAACACGT
TCTGTTGGAAGCAAATCCTACCTTTCTAATAAAGGATTATGATGATCCAA
AATTGTGGTCGGCTTTGGAAGAGCTTGATAAGAATAAGGATGCTTGAAGT
TTAAGTATTAAACATCTCAGCATAATATCACACTAATTGATTTTGTAAGT
TAATGTTTCATTTGAAGTACAAATTCTGATTAATAATAGTCCACATGAGA
CAATATTTACCCCTTTTTTCTTCCAGTGGAAATTGCAATTTAGAATAGAA
TTTTCAGCAGCTTCTTATATAATAGAAGAATATGGATACAAAAAATAAAA
CTCAGTCCAACTAGGAAACTTTGTCAACAAGTTATATATCAGAATTTTAA
TTTGAAAACACCAGCAAGTCTTAGAATCTGTCAATCGAAACAAAGTCGCT
TGATTCAACCTCTAGCTATATCACAAGGAATTTTTTGTATGTTTCTTGAC
ACCTCATCGAGTCCACGAGACGGAATCGATTTCATCCCTGGCTGACTTGT
ATAGCTCAAGCCGCTTGGCACATTGTTGCCTTCTTTCCATCAACATAGGA
TCTTCATCCAGCAATTGAGCAAGTTGCTTGCCCTAAACAGAAACAAAAAT
TATCAAACTTCAAGAATGATGAATAGAANATATTACAATAGCATGGACGG
AACTTAACAATGCCCCAGTTGTGTTAGTCAATTGAAAGAAAAAAGTGCCG
GTGATGGGGAAGGAAGCAACTGTTAAGTACCTCTTTTTT
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