EY666200

Overview
NameEY666200
Unique NameEY666200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.256e-45
Identity = 96/233 (41.20%), Postives = 142/233 (60.94%), Query Frame = 1
Query:   10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSN 693
            R+Y+GMWY KVS+RT VWVANR+ P+S+   + L+I   NLVL + S  P+W TN T  + RS V A LL  GN V+RD SNN  SE LWQSFD+P  T +P MKL +N +  +++ LTSW++ ++P+ G FS +L      ++ +       + RSGPW  N   FS +PE   L+Y +YNF  + N  E  +T+ + ++++ SR  +   G  +++ W P+   W  FWS+
Sbjct:   67 RWYLGMWYKKVSDRTYVWVANRDNPLSNAIGT-LKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMH-RSGPW--NGIRFSGIPEDQKLSYMVYNF--IENNEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSS 293          

HSP 2 Score: 36.1946 bits (82), Expect = 3.256e-45
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 3
Query:  702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785
            QC+ Y  CG ++ C+  T   C+C++GF
Sbjct:  298 QCDTYIMCGPYAYCDVNTSPVCNCIQGF 325          
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 6.538e-43
Identity = 88/232 (37.93%), Postives = 145/232 (62.50%), Query Frame = 1
Query:   10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDL-SNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTN-SWFLFWSN 693
            R+Y+G+WY K   RT VWVANR+ P+S+   + L+I   NLVL + S   +WSTN T  + RS V A LL+ GN V+RD  SNN S+ LWQSFD+P  T +P MKL ++ +  +++ LTSW++ ++P+ G +S +L      ++  L + S +  RSGPW +  +I  +  +  L+Y +YNF+   N  E+ +T+ + ++++ SR  +  +G  +++ W P++  W +FWS+
Sbjct:   68 RWYLGIWYKKFPYRTYVWVANRDNPLSNDIGT-LKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEF-YLSSGSFRLHRSGPW-NGFRISGIPEDQKLSYMVYNFT--ENSEEAAYTFLMTNNSFYSRLTISSTGYFERLTWAPSSVVWNVFWSS 294          

HSP 2 Score: 40.4318 bits (93), Expect = 6.538e-43
Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 3
Query:  693 PRQQCEVYAFCGQFSTCNEQTERFCSCLKGF 785
            P  QC++Y  CG +S C+  T   C+C++GF
Sbjct:  295 PNHQCDMYRMCGPYSYCDVNTSPVCNCIQGF 325          
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.885e-42
Identity = 92/233 (39.48%), Postives = 140/233 (60.09%), Query Frame = 1
Query:   10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGR-SVDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSN 693
            R+Y+G+WY K+ +RT VWVANR+ P+S+   + L+I   NLVL   +   +WSTN T  + R  V A LL+ GN V+RD SNN  SE LWQSFD+P  T +P MKL ++ +  +++ LTSW++ ++P+ G FS +L      ++  LW+      RSGPW  N   FS +PE   L+Y +YNF+   N  E  +T+ + +++  SR  +   G  +++ W P+   W  FWS+
Sbjct:   68 RWYLGIWYKKLLDRTYVWVANRDNPLSNAIGT-LKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEF-YLWHGIFPMHRSGPW--NGVRFSGIPEDQKLSYMVYNFT--ENSEEVAYTFRMTNNSIYSRLTLSSEGYFQRLTWNPSIGIWNRFWSS 294          

HSP 2 Score: 35.8094 bits (81), Expect = 1.885e-42
Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = 3
Query:  702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785
            QC+ Y  CG ++ C   T   C+C++GF
Sbjct:  299 QCDTYIMCGPYAYCGVNTSPVCNCIQGF 326          
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.434e-42
Identity = 96/235 (40.85%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDLS-NNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWSNQD 699
            R+Y+GMWY K+SERT VWVANR+ P+S    + L+I   NLVL + S   +WSTN T  + RS V A LL  GN VLRD + N+ S  LWQSFD+P  T +P MKL ++ R  +++ LTSW++ ++P+ G FS +L      ++  L+       RSGPW  N   FS +PE   L+Y +YNF+   N  E  +T+ + +++  SR  +  SG  +++ W P++  W +FWS+ +
Sbjct:   67 RWYLGMWYKKLSERTYVWVANRDNPLSCSIGT-LKISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEF-YLFKDDFLVHRSGPW--NGVGFSGMPEDQKLSYMVYNFT--QNSEEVAYTFLMTNNSIYSRLTISSSGYFERLTWTPSSGMWNVFWSSPE 295          

HSP 2 Score: 35.8094 bits (81), Expect = 5.434e-42
Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 3
Query:  702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785
            QC+VY  CG +S C+  T   C+C++ F
Sbjct:  298 QCDVYKICGAYSYCDVNTSPVCNCIQRF 325          
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.173e-37
Identity = 85/233 (36.48%), Postives = 132/233 (56.65%), Query Frame = 1
Query:   10 RYYIGMWYNKVS-ERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRSVDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQ-LLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEM-TLNYIYNFSYVSNENESYFTYSVKDS-TYTSRFIMDVSGQVKQMNWLPT-NSWFLFWS 690
            R+Y+G+WY   S  RT VWVANR+  + +   + L+I + +LVL + S  P+WSTN+T  +   V A LL  GN VLRD     L   +WQSFD+P  T +P MKL  N+  + ++ +LTSWK+  +P+ G +S  L  +G      L N   + +R+GPW  N   F+ +P+M   +YI N S++ N  E  +++ V ++    +RF M  +G ++ + W  T     +FWS
Sbjct:   71 RWYLGIWYKTTSGHRTYVWVANRDNALHNSMGT-LKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETEGFLHEFYLLNNEFKVYRTGPW--NGVRFNGIPKMQNWSYIDN-SFIDNNKEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWS 299          

HSP 2 Score: 38.1206 bits (87), Expect = 6.173e-37
Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 3
Query:  693 PRQQCEVYAFCGQFSTCNEQTERFCSCLKGFT-KIGE*LELEDFSVG 830
            P   C++Y  CG ++ C+  T   C+C+KGF  K     +L D S G
Sbjct:  301 PEDTCDLYKVCGPYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGG 347          
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.041e-37
Identity = 86/233 (36.91%), Postives = 133/233 (57.08%), Query Frame = 1
Query:   10 RYYIGMWYNKVS-ERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRSVDAVLLNEGNLVLRD-LSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQ-LLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEM-TLNYIYNFSYVSNENESYFTYSVKDS-TYTSRFIMDVSGQVKQMNWLPT-NSWFLFWS 690
            R+Y+G+WY   S  RT VWVANR+  + +   + L+I + +LVL + S  P+WSTN+T  +   V A LL  GN VLRD  +N+L   +WQSFD+P  T +P MKL  N   + ++ +LTSWK+  +P+ G FS  L  +G      L     + +R+GPW  N   F+ +P+M   +YI N S++ N  E  +++ V ++    +RF M  +G ++ + W  T     +FWS
Sbjct:   71 RWYLGIWYKTTSGHRTYVWVANRDNALHNSMGT-LKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMKLGRNLIGSENEKILTSWKSPTDPSSGDFSFILETEGFLHEFYLLKNEFKVYRTGPW--NGVRFNGIPKMQNWSYIDN-SFIDNNEEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWS 299          

HSP 2 Score: 38.1206 bits (87), Expect = 8.041e-37
Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 3
Query:  693 PRQQCEVYAFCGQFSTCNEQTERFCSCLKGFT-KIGE*LELEDFSVG 830
            P   C++Y  CG ++ C+  T   C+C+KGF  K     +L D S G
Sbjct:  301 PEDTCDLYKVCGPYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGG 347          
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.043e-37
Identity = 82/230 (35.65%), Postives = 134/230 (58.26%), Query Frame = 1
Query:   10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWS 690
            R+Y+G+WY KVS+RT VWVANR+ P+S    + L+I   N    + S   +WSTN T  + RS V A +L  GN V+RD +NN  S  LWQSFD P  T +P MKL+++ +  +++ LTS ++ ++P+ G FS +L P    ++  L +     +RSGPW +  +   L  +  L+Y+    Y+S +    + + + ++++ SR  +  SG ++Q  W P++  W  FW+
Sbjct:   65 RWYLGIWYKKVSDRTYVWVANRDNPLSSSIGT-LKISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEF-YLSSGVFLLYRSGPW-NGIRFSGLPDDQKLSYLV---YISQDMRVAYKFRMTNNSFYSRLFVSFSGYIEQQTWNPSSQMWNSFWA 288          

HSP 2 Score: 34.2686 bits (77), Expect = 8.043e-37
Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 3
Query:  702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785
            QC  Y  CG +S C   T   C+C++GF
Sbjct:  294 QCYTYRACGPYSYCVVNTSAICNCIQGF 321          
The following BLAST results are available for this feature:
BLAST of EY666200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SRK6_BRAOE3.256e-4541.20Putative serine/threonine-protein kinase receptor ... [more]
SLSG3_BRAOL6.538e-4337.93S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SLSG6_BRAOL1.885e-4239.48S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG2_BRAOA5.434e-4240.85S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG1_BRAOA6.173e-3736.48S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
SLSG0_BRAOA8.041e-3736.91S-locus-specific glycoprotein OS=Brassica oleracea... [more]
SLSG4_BRAOL8.043e-3735.65S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-015-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666200 ID=EY666200; Name=EY666200; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGCTATTACATAGGCATGTGGTACAATAAAGTCTCTGAAAG
AACTATAGTTTGGGTAGCCAACAGAGAACAGCCAGTTTCTGATCGATTCT
CTTCGGTTTTAAGAATCCATTATGGTAACTTAGTTCTTTTTAATGAGTCC
AAACTACCCATTTGGTCCACAAATTGGACCGCTACCAGCGGACGTTCTGT
GGACGCAGTTCTTTTAAATGAAGGAAATCTTGTTTTGAGAGATTTGTCAA
ATAATTTGTCAGAGCCGTTATGGCAAAGTTTTGATCATCCAGCTCATACT
TGGATTCCCGGTATGAAGCTGACGTTCAACAAGAGAAACAACGTCAGTCA
ACTTCTCACTTCATGGAAGAATAAAGAAAATCCTGCACCGGGTCTCTTCT
CCCTTGAGCTAGCACCAGATGGATCAAATCAATATGTTATTTTGTGGAAT
AGGTCTGAGCAGTACTGGAGAAGTGGACCTTGGGATGATAATGCAAAAAT
TTTCAGCTTGGTCCCTGAAATGACACTAAATTATATCTACAATTTCAGCT
ATGTGTCGAATGAAAACGAGAGCTATTTCACCTACAGTGTGAAAGATAGC
ACTTACACATCTCGATTCATTATGGATGTTTCAGGACAGGTTAAGCAGAT
GAATTGGTTGCCTACCAACTCTTGGTTTCTGTTTTGGTCCAACCAAGACA
GCAATGTGAGGTTTATGCTTTTTGTGGTCAATTTAGCACCTGCAATGAAC
AAACTGAGCGTTTTTGTTCTTGTTTGAAAGGTTTCACCAAAATCGGTGAG
TGACTGGAATTGGAAGATTTTTCTGTGGGTGGGGAAGGAAACCCGGCTGC
AGGTGAAATATTACCTTGCCATGGAAAAACCACCATTGTTCCGTACATA
back to top