EY666200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.256e-45 Identity = 96/233 (41.20%), Postives = 142/233 (60.94%), Query Frame = 1 Query: 10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSN 693 R+Y+GMWY KVS+RT VWVANR+ P+S+ + L+I NLVL + S P+W TN T + RS V A LL GN V+RD SNN SE LWQSFD+P T +P MKL +N + +++ LTSW++ ++P+ G FS +L ++ + + RSGPW N FS +PE L+Y +YNF + N E +T+ + ++++ SR + G +++ W P+ W FWS+ Sbjct: 67 RWYLGMWYKKVSDRTYVWVANRDNPLSNAIGT-LKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMH-RSGPW--NGIRFSGIPEDQKLSYMVYNF--IENNEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSS 293 HSP 2 Score: 36.1946 bits (82), Expect = 3.256e-45 Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 3 Query: 702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785 QC+ Y CG ++ C+ T C+C++GF Sbjct: 298 QCDTYIMCGPYAYCDVNTSPVCNCIQGF 325
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 6.538e-43 Identity = 88/232 (37.93%), Postives = 145/232 (62.50%), Query Frame = 1 Query: 10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDL-SNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTN-SWFLFWSN 693 R+Y+G+WY K RT VWVANR+ P+S+ + L+I NLVL + S +WSTN T + RS V A LL+ GN V+RD SNN S+ LWQSFD+P T +P MKL ++ + +++ LTSW++ ++P+ G +S +L ++ L + S + RSGPW + +I + + L+Y +YNF+ N E+ +T+ + ++++ SR + +G +++ W P++ W +FWS+ Sbjct: 68 RWYLGIWYKKFPYRTYVWVANRDNPLSNDIGT-LKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEF-YLSSGSFRLHRSGPW-NGFRISGIPEDQKLSYMVYNFT--ENSEEAAYTFLMTNNSFYSRLTISSTGYFERLTWAPSSVVWNVFWSS 294 HSP 2 Score: 40.4318 bits (93), Expect = 6.538e-43 Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 693 PRQQCEVYAFCGQFSTCNEQTERFCSCLKGF 785 P QC++Y CG +S C+ T C+C++GF Sbjct: 295 PNHQCDMYRMCGPYSYCDVNTSPVCNCIQGF 325
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.885e-42 Identity = 92/233 (39.48%), Postives = 140/233 (60.09%), Query Frame = 1 Query: 10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGR-SVDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSN 693 R+Y+G+WY K+ +RT VWVANR+ P+S+ + L+I NLVL + +WSTN T + R V A LL+ GN V+RD SNN SE LWQSFD+P T +P MKL ++ + +++ LTSW++ ++P+ G FS +L ++ LW+ RSGPW N FS +PE L+Y +YNF+ N E +T+ + +++ SR + G +++ W P+ W FWS+ Sbjct: 68 RWYLGIWYKKLLDRTYVWVANRDNPLSNAIGT-LKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEF-YLWHGIFPMHRSGPW--NGVRFSGIPEDQKLSYMVYNFT--ENSEEVAYTFRMTNNSIYSRLTLSSEGYFQRLTWNPSIGIWNRFWSS 294 HSP 2 Score: 35.8094 bits (81), Expect = 1.885e-42 Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = 3 Query: 702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785 QC+ Y CG ++ C T C+C++GF Sbjct: 299 QCDTYIMCGPYAYCGVNTSPVCNCIQGF 326
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.434e-42 Identity = 96/235 (40.85%), Postives = 143/235 (60.85%), Query Frame = 1 Query: 10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDLS-NNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNY-IYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWSNQD 699 R+Y+GMWY K+SERT VWVANR+ P+S + L+I NLVL + S +WSTN T + RS V A LL GN VLRD + N+ S LWQSFD+P T +P MKL ++ R +++ LTSW++ ++P+ G FS +L ++ L+ RSGPW N FS +PE L+Y +YNF+ N E +T+ + +++ SR + SG +++ W P++ W +FWS+ + Sbjct: 67 RWYLGMWYKKLSERTYVWVANRDNPLSCSIGT-LKISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEF-YLFKDDFLVHRSGPW--NGVGFSGMPEDQKLSYMVYNFT--QNSEEVAYTFLMTNNSIYSRLTISSSGYFERLTWTPSSGMWNVFWSSPE 295 HSP 2 Score: 35.8094 bits (81), Expect = 5.434e-42 Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 3 Query: 702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785 QC+VY CG +S C+ T C+C++ F Sbjct: 298 QCDVYKICGAYSYCDVNTSPVCNCIQRF 325
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.173e-37 Identity = 85/233 (36.48%), Postives = 132/233 (56.65%), Query Frame = 1 Query: 10 RYYIGMWYNKVS-ERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRSVDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQ-LLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEM-TLNYIYNFSYVSNENESYFTYSVKDS-TYTSRFIMDVSGQVKQMNWLPT-NSWFLFWS 690 R+Y+G+WY S RT VWVANR+ + + + L+I + +LVL + S P+WSTN+T + V A LL GN VLRD L +WQSFD+P T +P MKL N+ + ++ +LTSWK+ +P+ G +S L +G L N + +R+GPW N F+ +P+M +YI N S++ N E +++ V ++ +RF M +G ++ + W T +FWS Sbjct: 71 RWYLGIWYKTTSGHRTYVWVANRDNALHNSMGT-LKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETEGFLHEFYLLNNEFKVYRTGPW--NGVRFNGIPKMQNWSYIDN-SFIDNNKEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWS 299 HSP 2 Score: 38.1206 bits (87), Expect = 6.173e-37 Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 3 Query: 693 PRQQCEVYAFCGQFSTCNEQTERFCSCLKGFT-KIGE*LELEDFSVG 830 P C++Y CG ++ C+ T C+C+KGF K +L D S G Sbjct: 301 PEDTCDLYKVCGPYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGG 347
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.041e-37 Identity = 86/233 (36.91%), Postives = 133/233 (57.08%), Query Frame = 1 Query: 10 RYYIGMWYNKVS-ERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRSVDAVLLNEGNLVLRD-LSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQ-LLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEM-TLNYIYNFSYVSNENESYFTYSVKDS-TYTSRFIMDVSGQVKQMNWLPT-NSWFLFWS 690 R+Y+G+WY S RT VWVANR+ + + + L+I + +LVL + S P+WSTN+T + V A LL GN VLRD +N+L +WQSFD+P T +P MKL N + ++ +LTSWK+ +P+ G FS L +G L + +R+GPW N F+ +P+M +YI N S++ N E +++ V ++ +RF M +G ++ + W T +FWS Sbjct: 71 RWYLGIWYKTTSGHRTYVWVANRDNALHNSMGT-LKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMKLGRNLIGSENEKILTSWKSPTDPSSGDFSFILETEGFLHEFYLLKNEFKVYRTGPW--NGVRFNGIPKMQNWSYIDN-SFIDNNEEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWS 299 HSP 2 Score: 38.1206 bits (87), Expect = 8.041e-37 Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 3 Query: 693 PRQQCEVYAFCGQFSTCNEQTERFCSCLKGFT-KIGE*LELEDFSVG 830 P C++Y CG ++ C+ T C+C+KGF K +L D S G Sbjct: 301 PEDTCDLYKVCGPYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGG 347
BLAST of EY666200 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 8.043e-37 Identity = 82/230 (35.65%), Postives = 134/230 (58.26%), Query Frame = 1 Query: 10 RYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLRIHYGNLVLFNESKLPIWSTNWTATSGRS-VDAVLLNEGNLVLRDLSNN-LSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWS 690 R+Y+G+WY KVS+RT VWVANR+ P+S + L+I N + S +WSTN T + RS V A +L GN V+RD +NN S LWQSFD P T +P MKL+++ + +++ LTS ++ ++P+ G FS +L P ++ L + +RSGPW + + L + L+Y+ Y+S + + + + ++++ SR + SG ++Q W P++ W FW+ Sbjct: 65 RWYLGIWYKKVSDRTYVWVANRDNPLSSSIGT-LKISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEF-YLSSGVFLLYRSGPW-NGIRFSGLPDDQKLSYLV---YISQDMRVAYKFRMTNNSFYSRLFVSFSGYIEQQTWNPSSQMWNSFWA 288 HSP 2 Score: 34.2686 bits (77), Expect = 8.043e-37 Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 3 Query: 702 QCEVYAFCGQFSTCNEQTERFCSCLKGF 785 QC Y CG +S C T C+C++GF Sbjct: 294 QCYTYRACGPYSYCVVNTSAICNCIQGF 321 The following BLAST results are available for this feature:
BLAST of EY666200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY666200 ID=EY666200; Name=EY666200; organism=Citrus sinensis; type=EST; length=899bpback to top |