CX676099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676099 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.635e-17 Identity = 63/215 (29.30%), Postives = 102/215 (47.44%), Query Frame = 3 Query: 3 KIQAIVQMTSPRNLKEMQSLTGRLAALSRFISKATDKCQPFFQVIRRGKKTEWT-PECEEAFRNLKHYLQQAPLLSTPRDGDKLNLYLAVSDRAASSVLVREEEGIQYPIYYTSKALLDAETRYPTMEKWXXXXXXXXRKLRPYF--QAFPVSVITNQPLRQILHKPDASGRLVKWTVELSEFDIDYKPRAAIKAQAMADFVAEFAEPEVCLDQQ 638 KI+AI + P KE+++ G +FI D +P + +++ K + T PE + AF+ LK+ + + P+L P K L SD A +VL ++ +P+ Y S+ L + E Y T+EK + R Y + F +S +QPL + D + +L +W V+LSEFD D K K +AD ++ E L +Q Sbjct: 426 KIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQD----GHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEIS-SDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKG-KENCVADALSRIKLEETYLSEQ 634
BLAST of CX676099 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12 Identity = 54/223 (24.22%), Postives = 102/223 (45.74%), Query Frame = 3 Query: 6 IQAIVQMTSPRNLKEMQSLTGRLAALSRFISKATDKCQPFFQVIRRGKKTEWTPECEEAFRNLKHYLQQAPLLSTPRDGDKLNLYLAVSDRAASSVL-VREEEGIQYPIYYTSKALLDAETRYPTMEKWXXXXXXXXRKLRPYFQAF--PVSVITNQP--LRQILHKPDASG-RLVKWTVELSE--FDIDYKPRAAIKAQAMADFVAEFAEPEVCLDQQDADI 650 I ++Q P+N KE++ G + L +FI K + P ++++ + +WTP +A N+K L P+L K+ L SD A +VL + ++ YP+ Y S + A+ Y +K + R Y ++ P ++T+ + +I ++ + RL +W + L + F+I+Y+P +A + + EP + D +D I Sbjct: 627 IDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEP-IPKDSEDNSI 848
BLAST of CX676099 vs. ExPASy Swiss-Prot
Match: RTF22_SCHPO (Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12 Identity = 54/223 (24.22%), Postives = 102/223 (45.74%), Query Frame = 3 Query: 6 IQAIVQMTSPRNLKEMQSLTGRLAALSRFISKATDKCQPFFQVIRRGKKTEWTPECEEAFRNLKHYLQQAPLLSTPRDGDKLNLYLAVSDRAASSVL-VREEEGIQYPIYYTSKALLDAETRYPTMEKWXXXXXXXXRKLRPYFQAF--PVSVITNQP--LRQILHKPDASG-RLVKWTVELSE--FDIDYKPRAAIKAQAMADFVAEFAEPEVCLDQQDADI 650 I ++Q P+N KE++ G + L +FI K + P ++++ + +WTP +A N+K L P+L K+ L SD A +VL + ++ YP+ Y S + A+ Y +K + R Y ++ P ++T+ + +I ++ + RL +W + L + F+I+Y+P +A + + EP + D +D I Sbjct: 627 IDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEP-IPKDSEDNSI 848
BLAST of CX676099 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12 Identity = 54/223 (24.22%), Postives = 102/223 (45.74%), Query Frame = 3 Query: 6 IQAIVQMTSPRNLKEMQSLTGRLAALSRFISKATDKCQPFFQVIRRGKKTEWTPECEEAFRNLKHYLQQAPLLSTPRDGDKLNLYLAVSDRAASSVL-VREEEGIQYPIYYTSKALLDAETRYPTMEKWXXXXXXXXRKLRPYFQAF--PVSVITNQP--LRQILHKPDASG-RLVKWTVELSE--FDIDYKPRAAIKAQAMADFVAEFAEPEVCLDQQDADI 650 I ++Q P+N KE++ G + L +FI K + P ++++ + +WTP +A N+K L P+L K+ L SD A +VL + ++ YP+ Y S + A+ Y +K + R Y ++ P ++T+ + +I ++ + RL +W + L + F+I+Y+P +A + + EP + D +D I Sbjct: 627 IDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEP-IPKDSEDNSI 848 The following BLAST results are available for this feature:
BLAST of CX676099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX676099 ID=CX676099; Name=CX676099; organism=Citrus sinensis; type=EST; length=806bpback to top |