EY666194

Overview
NameEY666194
Unique NameEY666194
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24
Identity = 54/122 (44.26%), Postives = 86/122 (70.49%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            ++NLS  GQNL+TS+  WE  F + ++I+GLVL  FLIGN+Q YLQ+  TR +EM ++ ++  + M  + L  +++++++ Y++Y W++   +D E+ LS LPK+LRR+IKR LCL LL  V
Sbjct:  363 LQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRV 484
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.360e-23
Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            +RNLS  GQNLQTS    E  F I + ISGLVL   LIGN+Q YL++   R +EM +R ++  + M  + L   ++++++ Y++Y W++   ++ E+ L  LPK+LRR+IKR LCLDLLK V
Sbjct:  350 LRNLSALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKV 471
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.122e-22
Identity = 53/122 (43.44%), Postives = 83/122 (68.03%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            +RNLS  GQNL+TS+   E  F I++ ISGLVL   LIGN+Q YLQ+   R +EM ++ ++  + M  + L   ++++++ Y++Y W++   ++ E+ LS LPK+LR++IKR LCL LLK V
Sbjct:  354 LRNLSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKV 475
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            +RNLS  GQNL TS    E  F + + ISGLVL   LIGN+Q YL++   R +EM +R ++  + M  + L   ++++++ Y++Y W++   ++ E+ L  LPK+LRR+IKR  CLDLLK V
Sbjct:  351 LRNLSALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKV 472
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 51/122 (41.80%), Postives = 80/122 (65.57%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            ++NLS +GQNL TS++  E  F ILV I GLVL   LIGN+Q YLQ+   R +E  L+ ++  E M  + L ++++++++ + +Y W     +D E+ L  LP +LRR+I+R LCLDL++ V
Sbjct:  358 LQNLSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDLVRRV 479
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNG12_ARATH (Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana GN=CNGC12 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.582e-20
Identity = 49/122 (40.16%), Postives = 79/122 (64.75%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            +RN+S  GQNL+TS++A E FF I++ +SGL+L   LIGN+Q YLQ+  TR  EM  + ++  + M  + +   ++++++ ++ Y WR+    + E+ L  LPK+LR   KR L LD+LK V
Sbjct:  312 LRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEEKRRDTEKWMSYRVIPEYLKERIRRFEDYKWRETKGTEEEALLRSLPKDLRLETKRYLYLDMLKRV 433
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana GN=CNGC11 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 49/122 (40.16%), Postives = 79/122 (64.75%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            +RN+S  GQNL+TS++A E FF I++ +SGL+L   LIGN+Q YLQ+  TR  EM  + ++  + M  +++   ++++++ ++ Y WR+    + E+ L  LPK+LR   KR L L LLK V
Sbjct:  312 LRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEEKKRDTEKWMSYREIPEYLKERIRRFEDYKWRRTKGTEEEALLRSLPKDLRLETKRYLFLKLLKKV 433
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.123e-19
Identity = 47/122 (38.52%), Postives = 81/122 (66.39%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            ++NLS  GQ LQTS+   E  F I + ++GL+L   LIGN+Q YLQ+   R +EM ++ ++  + M  + L ++++++++ Y +Y W +   +D E+ +  LPK+LRR+IKR LCL+L++ V
Sbjct:  385 LQNLSTLGQGLQTSTYPGEVLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRV 506
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.123e-19
Identity = 48/122 (39.34%), Postives = 81/122 (66.39%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            ++NLS  GQ LQTS+   E  F I + I+GL+L   LIGN+Q YLQ+   R +EM ++ ++  + M  + L ++++++++ Y +Y W +   +D E+ +  LPK+LRR+IKR LCL+L++ V
Sbjct:  379 LQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRV 500
[Close]
BLAST of EY666194 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 2 
Query:   11 VRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNV 376
            ++NLS  GQNL TS+ A E  F I++   GLVL   LIGN+Q YLQ+   R +E  +R  +  + M  ++L   ++Q ++ Y +Y W     +D E+ L  LP +LRR+IKR LC DL++ V
Sbjct:  348 LKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRV 469
The following BLAST results are available for this feature:
BLAST of EY666194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CNGC1_ARATH7.513e-2444.26Cyclic nucleotide-gated ion channel 1 OS=Arabidops... [more]
CNG10_ARATH6.360e-2345.08Probable cyclic nucleotide-gated ion channel 10 OS... [more]
CNGC3_ARATH4.122e-2243.44Probable cyclic nucleotide-gated ion channel 3 OS=... [more]
CNG13_ARATH1.567e-2142.62Putative cyclic nucleotide-gated ion channel 13 OS... [more]
CNG14_ARATH2.954e-2041.80Probable cyclic nucleotide-gated ion channel 14 OS... [more]
CNG12_ARATH6.582e-2040.16Probable cyclic nucleotide-gated ion channel 12 OS... [more]
CNG11_ARATH8.596e-2040.16Cyclic nucleotide-gated ion channel 11 OS=Arabidop... [more]
CNGC8_ARATH1.123e-1938.52Putative cyclic nucleotide-gated ion channel 8 OS=... [more]
CNGC7_ARATH1.123e-1939.34Putative cyclic nucleotide-gated ion channel 7 OS=... [more]
CNG15_ARATH7.277e-1940.98Putative cyclic nucleotide-gated ion channel 15 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-015-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666194 ID=EY666194; Name=EY666194; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGTGAGAAATCTCAGTTGTTTTGGTCAGAACCTGCAAACAA
GTAGCAATGCTTGGGAAAACTTCTTTGTCATCTTGGTTACCATCTCTGGT
TTGGTGTTGATGCTCTTTCTCATTGGAAATATACAGATATACCTGCAGAC
CAAAGCTACACGACCAAAGGAGATGACCTTGAGGATGCAAGAGATGAATG
AGCACATGCCCATTCAAAAGCTCTCTAGGTCTGTTCAACAGCAGCTTAAG
ATATATCAACGATACATATGGCGAAAACCTGATACTATTGATGTAGAGAG
TTCACTTAGTATTCTTCCCAAAGAACTCAGAAGGAATATAAAGCGTGAAC
TGTGCTTAGACCTGCTAAAGAATGTGAGTCCTTTGTCTTTTTAGCACTGC
TCACCTTTGTAACTGGTAGGGAGTTCCAATCTTCTTGTATTTTATCACCT
TCTTCTATGAACTTATTATGTACAAAGAACAACTATTAACTACCAATGTC
AAGAATTTTGATTCAACTGCAGCAAAATCTATTATGTATATTAAATAAGA
TTTGATTACTGATAATATCTTGTGTTTTATCTTCCACAATAAACCATCTA
TGGACACATACATTTCAGTGGCACAATTAATTGCCTTATTAAGGAGTTAA
TCATTACCATGCGGAGGTTTTAAGCAATAAATTCTAAAGGAAATGTTCAA
TAAAAGGAAGGCTTGTCAATTTCTTTAAGTAAATGGAGAGAAATTAGATG
GGTTGGGAATTTAGCCGGTCAGATTTTGGGAATACTAGTTGGATTCATAA
CCTTTCCCCCAATTCCCCCTTATTGGCTGAAACTGTAAATATTCCCTTCG
CAATCTTGAAAGAAAAAAAGGGAAAGAGTTTAAAACT
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