CX676096

Overview
NameCX676096
Unique NameCX676096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX676096 vs. ExPASy Swiss-Prot
Match: DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 2 
Query:    5 CFRNLRHLSVKGCHFMKNLKWIRCAPNLRFLYVSDCHELSEIIGTYESPGTSEIEESHYVLSNLMFIDLQHLPSLTSICCRAVPLPYLKTISVNDCPGLRKLP 313
            CF NL  L +  CH MK+L WI  APNL  L + D  E+ EII   ++   + I         L ++ L +LP L SI    +P P L T+ V++CP LRKLP
Sbjct:  734 CFTNLSRLEIMKCHSMKDLTWILFAPNLVVLLIEDSREVGEIINKEKATNLTSITP----FLKLEWLILYNLPKLESIYWSPLPFPVLLTMDVSNCPKLRKLP 832
[Close]
BLAST of CX676096 vs. ExPASy Swiss-Prot
Match: DRL18_ARATH (Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.073e-13
Identity = 42/103 (40.78%), Postives = 54/103 (52.43%), Query Frame = 2 
Query:    5 CFRNLRHLSVKGCHFMKNLKWIRCAPNLRFLYVSDCHELSEIIGTYESPGTSEIEESHYVLSNLMFIDLQHLPSLTSICCRAVPLPYLKTISVNDCPGLRKLP 313
            CF NL  L +  CH MK+L WI  APNL  L++ D  E+ EII   ++   + I         L  + L +LP L SI    +P P L  I V +CP LRKLP
Sbjct:  747 CFTNLSRLDIVKCHSMKDLTWILFAPNLVVLFIEDSREVGEIINKEKATNLTSITP----FLKLERLILCYLPKLESIYWSPLPFPLLLNIDVEECPKLRKLP 845
[Close]
BLAST of CX676096 vs. ExPASy Swiss-Prot
Match: DRL17_ARATH (Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana GN=At1g61300 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12
Identity = 42/103 (40.78%), Postives = 54/103 (52.43%), Query Frame = 2 
Query:    5 CFRNLRHLSVKGCHFMKNLKWIRCAPNLRFLYVSDCHELSEIIGTYESPGTSEIEESHYVLSNLMFIDLQHLPSLTSICCRAVPLPYLKTISVNDCPGLRKLP 313
            CF NL  L +  CH +K+L WI  APNL +LY+ D  E+ EII   ++   + I         L  + L +LP L SI    +  P L  I V DCP LRKLP
Sbjct:  622 CFTNLSRLGLSKCHSIKDLTWILFAPNLVYLYIEDSREVGEIINKEKATNLTSITP----FLKLERLILYNLPKLESIYWSPLHFPRLLIIHVLDCPKLRKLP 720
[Close]
BLAST of CX676096 vs. ExPASy Swiss-Prot
Match: DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.235e-11
Identity = 43/103 (41.75%), Postives = 51/103 (49.51%), Query Frame = 2 
Query:    5 CFRNLRHLSVKGCHFMKNLKWIRCAPNLRFLYVSDCHELSEIIGTYESPGTSEIEESHYVLSNLMFIDLQHLPSLTSICCRAVPLPYLKTISVNDCPGLRKLP 313
            CF NL  L +  CH MK+L WI  APNL  L + D  E+ EII   ++   + I      L  L    L  LP L SI    +P P L  I V  CP LRKLP
Sbjct:  740 CFTNLTGLIIMKCHSMKDLTWILFAPNLVNLDIRDSREVGEIINKEKAINLTSIITPFQKLERLF---LYGLPKLESIYWSPLPFPLLSNIVVKYCPKLRKLP 839
[Close]
BLAST of CX676096 vs. ExPASy Swiss-Prot
Match: RPS2_ARATH (Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11
Identity = 31/103 (30.10%), Postives = 56/103 (54.37%), Query Frame = 2 
Query:    5 CFRNLRHLSVKGCHFMKNLKWIRCAPNLRFLYVSDCHELSEIIGTYESPGTSEIEESHYVLSNLMFIDLQHLPSLTSICCRAVPLPYLKTISVNDCPGLRKLP 313
            C RN+R +++  C+ +KN+ W++  P L  + + DC E+ E+I  +ESP      E   +  +L  +  + LP L SI         ++T+ + +CP ++KLP
Sbjct:  770 CLRNIRCINISHCNKLKNVSWVQKLPKLEVIELFDCREIEELISEHESPSV----EDPTLFPSLKTLRTRDLPELNSILPSRFSFQKVETLVITNCPRVKKLP 868
The following BLAST results are available for this feature:
BLAST of CX676096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DRL15_ARATH1.400e-1340.78Probable disease resistance protein At1g61180 OS=A... [more]
DRL18_ARATH4.073e-1340.78Probable disease resistance protein At1g61310 OS=A... [more]
DRL17_ARATH2.021e-1240.78Probable disease resistance protein At1g61300 OS=A... [more]
DRL16_ARATH2.235e-1141.75Probable disease resistance protein At1g61190 OS=A... [more]
RPS2_ARATH8.493e-1130.10Disease resistance protein RPS2 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_67A10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-67A10-A19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676096 ID=CX676096; Name=CX676096; organism=Citrus sinensis; type=EST; length=615bp
CTACTGTTTCCGTAACCTTCGTCATCTATCTGTCAAGGGCTGTCACTTTA
TGAAAAATTTGAAATGGATCAGATGTGCTCCAAACCTTCGATTTCTTTAT
GTTAGCGACTGTCACGAATTATCTGAAATAATTGGCACTTATGAATCACC
TGGGACTTCTGAAATTGAAGAAAGTCATTACGTTCTCTCAAACCTCATGT
TCATTGATCTTCAGCATCTACCAAGCCTAACAAGCATATGCTGCAGAGCA
GTGCCGCTTCCTTACCTCAAAACTATATCTGTAAACGACTGCCCAGGTTT
GAGAAAGCTCCCGCTAAACTCTGGAAGTGCAAACAATAGTCTGAATGCAA
TCTGTGGCAGTAGGGAATGGTGGGATCAGCTAGAGTGGGAGGATGAAGAC
GCCAAGAATGTTTTTGGATCAAAATTTCTTGCACTATAAATTCATGATAG
CAGACTGTATGCATCTGAAGAGTGCTTGAGGATTGTGTTTGAAGACTGAA
TCATCAAGAATTCGGAACGTTCGAATAAATGTTCGTACAAACTATGTGAC
CCCTATTGGTGTTTATAGCGTGTGATTTATCTATTTTATTATTTACTTTA
AAAAAAAAAAAAAAA
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