CN182826

Overview
NameCN182826
Unique NameCN182826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: NQR_SOLTU (NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.288e-71
Identity = 126/187 (67.38%), Postives = 152/187 (81.28%), Query Frame = 3
Query:   27 VASQPVIKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYIDISPLPMLNTDLEVDGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPNVWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAFKGIYL 587
            +A+QPVIK+A +CGSLRK S+NRGL+ +A+E+ K+S+ GMEIEY+DISPLP LNTDLEV+GTYPPVVEAFR+KI +AD +LFA PEYNYS+TGPLKNAIDWASRPPNVW                   QYHLRQIGV+LDLHF+NKPE+FLNAFQ P KFDSDG L DEE+K++L+AVLLA + + L
Sbjct:    1 MAAQPVIKVAGLCGSLRKGSYNRGLLNAAMEICKDSITGMEIEYVDISPLPFLNTDLEVNGTYPPVVEAFRKKIEEADCFLFASPEYNYSITGPLKNAIDWASRPPNVWADKAAAMVSAGGGFGGGRSQYHLRQIGVFLDLHFINKPEFFLNAFQQPPKFDSDGVLTDEETKQRLRAVLLALQALAL 187          
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: NQR_ARATH (NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.635e-70
Identity = 126/191 (65.97%), Postives = 155/191 (81.15%), Query Frame = 3
Query:   15 MEAMVASQPVIKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYIDISPLPMLNTDLEVDGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPNVWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAFKGIYL 587
            MEA+ A +P+I++AA+ GSLRK SF+ GL+R+AI+LTKESV G++IEYIDISPLP++NTDLEV+GTYPPVVEAFRQKIL+ADS LFA PEYN+SV+ PLKNA+DWASRPPNVW                   QYHLRQIGV+LDLHF+NKPE+ LNAFQPP KFD++GNL+DE +KE+LK VLL+ +   L
Sbjct:    1 MEAVTAIKPLIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLEVNGTYPPVVEAFRQKILEADSILFASPEYNFSVSAPLKNALDWASRPPNVWADKPAAIISTGGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKFDAEGNLVDEVTKERLKQVLLSLQAFTL 191          
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: NQR1_ORYSJ (Probable NADPH:quinone oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os01g0953600 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.902e-56
Identity = 106/192 (55.21%), Postives = 138/192 (71.88%), Query Frame = 3
Query:   15 MEAMVASQPVIKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYIDISPLPMLNTDLEV-DGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPNVWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAFKGIYL 587
            MEA  A++PVI++AAICGSLRKAS+N GL+R+A  + +ES+ G+ ++++DIS LP+LNTDLE  DG +PP VEAFR K+ QAD +LF  PEYNYS+  PLKNA+DWASR  N W                   QYHLRQ+GV+LDLHF+NKPE  + AF+ P KFDSDGNLID + +E++K VLL+ +   L
Sbjct:    1 MEA-AAARPVIRVAAICGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDLETADGGFPPAVEAFRDKVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAIVSAGGGFGGGRSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIKQVLLSLQAFTL 191          
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: NQR2_ORYSJ (Probable NADPH:quinone oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os01g0954000 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.936e-55
Identity = 101/185 (54.59%), Postives = 130/185 (70.27%), Query Frame = 3
Query:   33 SQPVIKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYIDISPLPMLNTDLEVDGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPNVWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAFKGIYL 587
            S   +++AAI GSLR+ S N GLIR+A E+ +ES+ GM I+++DI  LP+LNTD+EVD  +PP VEAFR  +  AD +LFA PEYNYS++GPLKNA+DW SRPPN W                    YH+RQ+GV+LD+HF+NKPE F+ A QPP KFDSDGNLID E KE+LK +LL+ +   L
Sbjct:    6 SPKALRVAAISGSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDMEVDDGFPPAVEAFRASVRAADCFLFASPEYNYSISGPLKNALDWGSRPPNCWADRAAAIVSASGGSGGSRSMYHIRQVGVFLDIHFINKPEVFIKAHQPPKKFDSDGNLIDPEIKEELKDMLLSLQAFAL 190          
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: YIEF_SHIFL (Uncharacterized protein yieF OS=Shigella flexneri GN=yieF PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20
Identity = 64/179 (35.75%), Postives = 93/179 (51.96%), Query Frame = 3
Query:   45 IKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYI-DISPLPMLNTDLEVDGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPN--VWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAF 572
            +++  + GSLRK SFN  + R+   L K +   ME+  +  I+ +P+ + D++ +  +P  VEA  ++I QAD  +   PEYNYSV G LKNAIDW SR P+  +                    QYHLRQI V+LD   +NKPE+     Q        G +ID+ + + L   L AF
Sbjct:    5 LQVVTLLGSLRKGSFNGMVART---LPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVD-PQTGEVIDQGTLDHLTGQLTAF 179          
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: YIEF_ECOLI (Uncharacterized protein yieF OS=Escherichia coli (strain K12) GN=yieF PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20
Identity = 64/179 (35.75%), Postives = 93/179 (51.96%), Query Frame = 3
Query:   45 IKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYI-DISPLPMLNTDLEVDGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPN--VWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAF 572
            +++  + GSLRK SFN  + R+   L K +   ME+  +  I+ +P+ + D++ +  +P  VEA  ++I QAD  +   PEYNYSV G LKNAIDW SR P+  +                    QYHLRQI V+LD   +NKPE+     Q        G +ID+ + + L   L AF
Sbjct:    5 LQVVTLLGSLRKGSFNGMVART---LPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVD-PQTGEVIDQGTLDHLTGQLTAF 179          
BLAST of CN182826 vs. ExPASy Swiss-Prot
Match: YIEF_ECO57 (Uncharacterized protein yieF OS=Escherichia coli O157:H7 GN=yieF PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20
Identity = 64/179 (35.75%), Postives = 93/179 (51.96%), Query Frame = 3
Query:   45 IKIAAICGSLRKASFNRGLIRSAIELTKESVKGMEIEYI-DISPLPMLNTDLEVDGTYPPVVEAFRQKILQADSYLFACPEYNYSVTGPLKNAIDWASRPPN--VWXXXXXXXXXXXXXXXXXXXQYHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLAF 572
            +++  + GSLRK SFN  + R+   L K +   ME+  +  I+ +P+ + D++ +  +P  VEA  ++I QAD  +   PEYNYSV G LKNAIDW SR P+  +                    QYHLRQI V+LD   +NKPE+     Q        G +ID+ + + L   L AF
Sbjct:    5 LQVVTLLGSLRKGSFNGMVART---LPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVD-PQTGEVIDQGTLDHLTGQLTAF 179          
The following BLAST results are available for this feature:
BLAST of CN182826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
NQR_SOLTU3.288e-7167.38NAD(P)H:quinone oxidoreductase OS=Solanum tuberosu... [more]
NQR_ARATH3.635e-7065.97NADPH:quinone oxidoreductase OS=Arabidopsis thalia... [more]
NQR1_ORYSJ3.902e-5655.21Probable NADPH:quinone oxidoreductase 1 OS=Oryza s... [more]
NQR2_ORYSJ1.936e-5554.59Probable NADPH:quinone oxidoreductase 2 OS=Oryza s... [more]
YIEF_SHIFL1.186e-2035.75Uncharacterized protein yieF OS=Shigella flexneri ... [more]
YIEF_ECOLI1.186e-2035.75Uncharacterized protein yieF OS=Escherichia coli (... [more]
YIEF_ECO571.186e-2035.75Uncharacterized protein yieF OS=Escherichia coli O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0003B07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0003B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182826 ID=CN182826; Name=CN182826; organism=Citrus sinensis; type=EST; length=704bp
GAGGCTAGAGCATAATGGAGGCCATGGTAGCATCGCAACCAGTGATTAAA
ATTGCAGCTATTTGTGGCTCCCTTCGTAAGGCCTCCTTCAATCGTGGCCT
CATTCGCTCTGCGATTGAATTAACAAAAGAGTCAGTTAAGGGCATGGAAA
TAGAGTACATAGACATATCGCCATTGCCAATGCTCAACACCGATCTCGAG
GTCGACGGCACTTATCCCCCCGTCGTTGAAGCTTTCCGTCAGAAGATTCT
TCAAGCTGATTCCTACCTCTTCGCTTGCCCTGAGTATAATTACTCTGTTA
CGGGGCCTTTGAAGAATGCAATTGACTGGGCATCTAGACCACCAAATGTT
TGGGCTGACAAAGCTGCTGCCATCGTAAGTGCTGCTGGAGGTTCTGGCGG
GGCACGAGCACAATATCACCTTCGCCAAATTGGAGTTTATCTTGATCTTC
ATTTCGTCAATAAACCGGAGTATTTCTTAAACGCATTCCAACCTCCTGCT
AAGTTTGATAGCGATGGCAATTTGATTGACGAAGAATCCAAGGAGAAGTT
AAAAGCAGTTCTTCTTGCCTTTAAGGGCATTTACCTTGCGACTCCAAGGT
ATTTGCTAAATTTAAGGTATATTAATGTTTGATTCATTTTGTAGTTCGAC
CTTTGATTAAATGGGATGATATTGCTTCACACGGACCTTCATATTCTTTT
GGAC
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