EY666173

Overview
NameEY666173
Unique NameEY666173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8046 contig Csv1_Contig8046:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: YQL5_SCHPO (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe GN=SPCC1827.05c PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.319e-29
Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  224 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKI 619
            +K++E K L  K  VLY+GR+PHGFYEK+M+ +FSQFG + RLR++RN+ TG SKH+ FIEF   +VA VVA+ MH YLL+  +LQ  +IP + VH  +++G +  +K +    + R    K  + E+  K+
Sbjct:   92 KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQHEKPLSKEKADKL 223          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_DANRE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=mki67ip PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 8.018e-26
Identity = 54/124 (43.55%), Postives = 81/124 (65.32%), Query Frame = 2
Query:  266 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGF-----NPRYKPVDRVQVERKLQNKERTLEEHKKIG 622
            VLY+G +P G +E +++++F QFG + RLR++R+K TG SK +GF+EF   EVA++VA+ M+ YL+ E I++ H+IPPE VH KL+ G       P+Y  V R        NK  T ++ KK+G
Sbjct:   46 VLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIKCHVIPPEKVHEKLFVGSIAGFKKPKYPAVTR-------YNKTHTEDDVKKVG 162          

HSP 2 Score: 28.8758 bits (63), Expect = 8.018e-26
Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  628 KILKRDQKRRKRIEAAGIEYECP 696
            K+L ++ K RKR+ A GI+Y+ P
Sbjct:  164 KLLSKESKLRKRLAAKGIDYDFP 186          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_XENTR (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=mki67ipl PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.767e-25
Identity = 51/118 (43.22%), Postives = 77/118 (65.25%), Query Frame = 2
Query:  266 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKI 619
            V+YIG IP   YE +++ +FSQFG + RLR++R+K TG SK + ++EF   EVA++VAD M+ YL  E +L+   +PPE VHP+L+ G   +++   +  V R   NK R+  E KK+
Sbjct:   42 VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAEQKKM 157          

HSP 2 Score: 28.1054 bits (61), Expect = 1.767e-25
Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  610 QKNWWRKILKRDQKRRKRIEAAGIEYECP 696
            QK   +++L ++ K RKR+   GI+Y+ P
Sbjct:  154 QKKMTQRMLSKENKVRKRLAEKGIDYDFP 182          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_XENLA (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=mki67ipl PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.636e-23
Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 2
Query:  266 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKKI 619
            V+YIG IP    E ++Q +F+QFG + RLR++R+K TG SK + ++E+   EVA++VAD M+ YL  E +L+   + PE VHP+L+ G N R++   +  V R   N +R  EE KK+
Sbjct:   42 VIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLKCEFVTPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEEVKKM 157          

HSP 2 Score: 25.409 bits (54), Expect = 2.636e-23
Identity = 9/28 (32.14%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  613 KNWWRKILKRDQKRRKRIEAAGIEYECP 696
            K   ++++ ++ K RKR+   GI+Y+ P
Sbjct:  155 KKMTQRMISKEYKLRKRLAEKGIDYDFP 182          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_BOVIN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus GN=MKI67IP PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.426e-23
Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 2
Query:  266 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFN-----PRYKPVDRVQVERKLQNKERTLEEHKK 616
            V+Y+G +P   YE +++A+FSQFG + R R++R+K TG SK +GF+EF   +VA++ A+ M+ YL  E +L+ H IPPE VH +L+R ++     P Y  V R    R L  K R  E  KK
Sbjct:   46 VIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVHEELFREWHMPFKRPSYPAVKRYNQNRSLVQKLRMEERFKK 167          

HSP 2 Score: 21.9422 bits (45), Expect = 3.426e-23
Identity = 9/23 (39.13%), Postives = 14/23 (60.87%), Query Frame = 1
Query:  637 KRDQKRRKRIEAAGIEYECPENV 705
            K+++  RKR+   GI+Y  P  V
Sbjct:  167 KKEKLLRKRLAKKGIDYNFPSLV 189          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: NOP15_YEAST (Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae GN=NOP15 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.678e-22
Identity = 51/131 (38.93%), Postives = 83/131 (63.36%), Query Frame = 2
Query:  224 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEHKK 616
            +K  ++K L   + ++Y+ R+PHGF+EKE+  +F+QFG +K +R+ARNK TG S+H+GF+EF + E A +  ++M+ YLL  H+LQV ++P      KL       YK   RV VE+ +    + L+++ K
Sbjct:   78 KKSKDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVLPKGAKIEKL-------YKYKKRVLVEKGITKPVKQLKDNMK 201          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_HUMAN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=MKI67IP PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 2
Query:  266 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFN-----PRYKPVDRVQVERKLQNKERTLEEHKK 616
            V+Y+  +P+   E ++ ++FSQFG + R R++R+K TG SK + F+EF   +VA++VA+ M+ YL  E +L+ H +PPE VH +L++ +N     P Y  V R    R L  K R  E  KK
Sbjct:   46 VVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFKQPSYPSVKRYNRNRTLTQKLRMEERFKK 167          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_RAT (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus norvegicus GN=Mki67ip PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.990e-16
Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 2
Query:  224 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNK 589
            R+  ++K     + V+Y+G +P    E  +  + +QFG I+R R++R+K TG S+ F F+EF   +VA++VA+ M  YL  E +L    +P E VH  L+   N  + P     V+R  Q +
Sbjct:   31 RRAKKKKEEKLNSGVVYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPREKVHKDLFNQCNVPFHPPSFPAVKRYNQKR 152          

HSP 2 Score: 24.6386 bits (52), Expect = 8.990e-16
Identity = 12/32 (37.50%), Postives = 19/32 (59.38%), Query Frame = 1
Query:  637 KRDQKRRKRIEAAGIEYECPENVGNVMPGPKK 732
            K+++  RK++   GI+Y  P     V+P PKK
Sbjct:  166 KKEKLLRKKLAKKGIDYSFP---SLVLPKPKK 194          
BLAST of EY666173 vs. ExPASy Swiss-Prot
Match: MK67I_MOUSE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus GN=Mki67ip PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.280e-15
Identity = 44/149 (29.53%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  206 LEGGPGRKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFN-----PRYKPVDR----------VQVERKLQNKERTLEE 607
            ++G   +   ++K  +N+  V+Y+G +P    E  +  + +QFG I R R++R+K TG SK + F+EF   +VA++VA+ M  YL  E +L    +P + VH  L+   N     P +  V R          +++E + + KE+ L +
Sbjct:   29 IQGRTKKPQQKKKEKLNRG-VVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPRKKVHKDLFSQRNALFHRPSFPAVKRYNRKRGHLQMLKMEYRFKKKEKLLRK 176          

HSP 2 Score: 26.1794 bits (56), Expect = 7.280e-15
Identity = 13/33 (39.39%), Postives = 20/33 (60.61%), Query Frame = 1
Query:  637 KRDQKRRKRIEAAGIEYECPENVGNVMPGPKKI 735
            K+++  RK++ A GI+Y  P     V+P PK I
Sbjct:  169 KKEKLLRKKLAAKGIDYSFP---SLVLPKPKNI 198          
The following BLAST results are available for this feature:
BLAST of EY666173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YQL5_SCHPO4.319e-2944.70Uncharacterized RNA-binding protein C1827.05c OS=S... [more]
MK67I_DANRE8.018e-2643.55MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
MK67I_XENTR1.767e-2543.22MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
MK67I_XENLA2.636e-2342.37MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
MK67I_BOVIN3.426e-2342.62MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
NOP15_YEAST6.678e-2238.93Ribosome biogenesis protein 15 OS=Saccharomyces ce... [more]
MK67I_HUMAN1.066e-1939.34MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
MK67I_RAT8.990e-1633.61MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
MK67I_MOUSE7.280e-1529.53MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666173 ID=EY666173; Name=EY666173; organism=Citrus sinensis; type=EST; length=861bp
TGAGCGCAGTACGGTCGGATTCCGGGTCGACCACGCGTCCGCCCAATTTC
CTCTCGAGAGACAGCAGGGGCTCACAGGAAGCTACTGAGTAACAAAAAGT
GAGATGGGGGCCAAGCAAAAGAAAGCATTGAAGAAGAATTTGAAGAAAGT
TTCTTCACAGTTACCAGTTCCCAGTGATAAAAAAGGCGCCGCCGATTTCT
TGCCGCTGGAAGGTGGGCCTGGGCGAAAACTTACTGAGGAGAAGCCACTA
GTAAATAAAGCTACGGTGTTATACATTGGCCGGATTCCACATGGGTTCTA
TGAGAAGGAAATGCAAGCTTTCTTTAGCCAATTTGGTGCAATCAAGAGGC
TAAGAATCGCGCGGAATAAAATGACTGGACAGTCAAAGCATTTTGGGTTC
ATCGAATTTAATGATCCTGAGGTAGCAGAAGTTGTAGCTGATGCCATGCA
TGGTTATTTGTTGTTTGAGCACATTTTGCAAGTGCATCTTATTCCTCCAG
AACATGTTCATCCAAAACTATGGAGAGGCTTCAATCCTCGATACAAGCCA
GTTGACCGGGTTCAAGTGGAACGTAAGCTACAAAACAAGGAAAGAACTTT
GGAAGAACACAAAAAAATTGGTGGAGAAAAATCTTGAAGCGTGATCAGAA
GCGGCGCAAGAGGATAGAGGCTGCTGGTATTGAGTATGAATGCCCTGAAA
ATGTGGGAAATGTCATGCCTGGGCCCAAAAAAATCAAGTTCAATGGAAGG
GTGATTGCGCCCCCCAGAAGTTCTGACTTAAAATTTTTTTAAAAAATGGA
AGGGGTCTTTCCTAATTTCTCCCCTCCCATTGGAAAAATAAAAGGGGGTT
TTTTCTTATGA
back to top