CN189217

Overview
NameCN189217
Unique NameCN189217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length227
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN189217 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.631e-23
Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 3 
Query:   63 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVINDDD 227
            MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKV +DDD
Sbjct:    1 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDD 55
The following BLAST results are available for this feature:
BLAST of CN189217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
VPE_CITSI6.631e-2396.36Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001I01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001I01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189217 ID=CN189217; Name=CN189217; organism=Citrus sinensis; type=EST; length=227bp
TGCTCGACGTTTTTTTTTTTAATAACTATCTCCAGCAACCAATCAACCCC
CTTCAAAAAACCATGACGCGCCTTGCCTCCGGCGTGCTAATCACGCTCCT
AGTCGCTCTTGCAGGAATCGCCGATGGAAGCAGAGACATAGCAGGTGACA
TTCTGAAGCTACCATCGGAAGCCTATAGGTTCTTCCATAATGGTGGGGGA
GGGGCAAAGGTCATCAATGATGATGAT
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