EY666165

Overview
NameEY666165
Unique NameEY666165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_ARATH (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3)

HSP 1 Score: 335.88 bits (860), Expect = 1.673e-91
Identity = 161/207 (77.78%), Postives = 185/207 (89.37%), Query Frame = 2
Query:   41 RNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGQDEV 661
            R IS AVSNC LKEK+D+WE PVMLDAPVSGGVLAAEAGTLTFMVGG EDAY AA+P+  SMG+ +IYCGG+GNG+AAKICNNL MAVSMLG SEAL LGQSLGISASTLT++LN+SS RCWSSD+YNPVPGVM+GVP+SR+Y GGFASKLMAKDLNLA ASA+EVG   PL S+AQ+IY K+CE GH++KDFSCVF+H+Y G+DEV
Sbjct:  141 RKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSLGISASTLTEVLNTSSGRCWSSDAYNPVPGVMKGVPSSRDYNGGFASKLMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCVFRHFYNGKDEV 347          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.261e-53
Identity = 108/196 (55.10%), Postives = 129/196 (65.82%), Query Frame = 2
Query:   47 ISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 634
            I  AVS  + KE +      V +DAPVSGGV AA +G LTFMVGG ED + AA+ L   MG N +YCG  G G AAKICNN+ +A+SM+G +EA+ LG  LG+    L KILN SS RCWSSD+YNPVPGVM+GVP++ NY GGF + LMAKDL LA  SA        L S A  IY  +C  G+  KDFS VFQ
Sbjct:  135 IDPAVSKELAKEVEKM--GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGATLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_HUMAN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.261e-53
Identity = 108/196 (55.10%), Postives = 129/196 (65.82%), Query Frame = 2
Query:   47 ISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 634
            I  AVS  + KE +      V +DAPVSGGV AA +G LTFMVGG ED + AA+ L   MG N +YCG  G G AAKICNN+ +A+SM+G +EA+ LG  LG+    L KILN SS RCWSSD+YNPVPGVM+GVP++ NY GGF + LMAKDL LA  SA        L S A  IY  +C  G+  KDFS VFQ
Sbjct:  135 IDPAVSKELAKEVEKM--GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_BOVIN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=HIBADH PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.261e-53
Identity = 103/176 (58.52%), Postives = 122/176 (69.32%), Query Frame = 2
Query:  107 VMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 634
            V +DAPVSGGV AA +G LTFMVGG E+ + AA+ L   MG N +YCG  G G AAKICNNL +A+SM+G +EA+ LG  LG+    L KILN SS RCWSSD+YNPVPGVM+GVP++ NY GGF + LMAKDL LA  SA        L SQA  IY  +C  G+  KDFS VFQ
Sbjct:  153 VFMDAPVSGGVGAARSGNLTFMVGGVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSQAHQIYRMMCAKGYSKKDFSSVFQ 328          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.999e-52
Identity = 106/197 (53.81%), Postives = 128/197 (64.97%), Query Frame = 2
Query:   47 ISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQH 637
            I  +VS  + KE +      V +DAPVSGGV AA +G LTFMVGG ED + AA+ L   MG N +YCG  G G +AKICNN+ +A+SM+G +EA+ LG   G+    L KILN SS RCWSSD+YNPVPGVM GVP+S NY GGF + LMAKDL LA  SA        L S A  IY  +C  G+  KDFS VFQ+
Sbjct:  134 IDPSVSKELAKEVEKM--GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSLAHQIYRMMCSKGYSKKDFSSVFQY 328          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 5.817e-52
Identity = 105/197 (53.30%), Postives = 130/197 (65.99%), Query Frame = 2
Query:   47 ISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQH 637
            I  +VS  + KE +      V +DAPVSGGV AA +G LTFMVGG E+ + AA+ L   MG N +YCG  G+G +AKICNN+ +A+SM+G +EA+ LG   G+    L KILN SS RCWSSD+YNPVPGVM+GVP+S NY GGF + LMAKDL LA  SA        L S A  IY  +C  G+  KDFS VFQ+
Sbjct:  134 IDPSVSKELAKEVEKM--GAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSVAHQIYRMMCSKGYSKKDFSSVFQY 328          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.314e-47
Identity = 94/174 (54.02%), Postives = 112/174 (64.37%), Query Frame = 2
Query:  110 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVF 631
            MLD PVSGG   AEAGTLTFMVGGSE  +  AK     MGKN ++CG  G G  AK+CNNL + +SM+ VSEA+ LG   G+    L  I N+SSARCW+S+ YNP PGV+E  PASR Y GGF S LM KDL LA+ SAK +G    L + A  +Y  L   G   KDFS V+
Sbjct:  137 MLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDPKKLAGIFNTSSARCWTSELYNPCPGVIETSPASRGYTGGFGSALMTKDLGLAVDSAKSIGEPLLLGNSAHQLYTLLVAKGDGQKDFSVVY 310          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_DROME (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG15093 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.652e-46
Identity = 95/196 (48.47%), Postives = 126/196 (64.29%), Query Frame = 2
Query:   50 SAAVSNCILK--EKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVF 631
            S+ +S  ++K  +KK S +    +DAPVSGGV  AE  TLTFMVGG+E  Y A K +   MGK   +CG  G G AAK+CNN+ +A+SM+GVSEA+ L    G+ A+   +I+NSS+ RCW+S+ YNPVPGV    PA+R+Y GGF+S L+ KDL LA   A       PL S A  +Y  LC+ G  +KDFS V+
Sbjct:  119 SSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVY 314          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: 3HIDH_CAEEL (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=B0250.5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 85/176 (48.30%), Postives = 116/176 (65.91%), Query Frame = 2
Query:  113 LDAPVSGGVLAAEAGTLTFMVGGSEDA-YQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCEN-GHDSKDFSCVFQ 634
            +DAP+SGGV  A+  TLTFMVG   DA ++ A+ +   MGKN +  G  GNG AAKICNN+ + + M+ V+E + LG S+G+ A  L  I+N+SS RCWSSD+YNPVPGV+E +P+ R Y GGF + LMAKDL+LA  ++       P+ S A  IY  L  +  + +KDF  V+Q
Sbjct:  117 IDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLDAKALAGIVNTSSGRCWSSDTYNPVPGVIENIPSCRGYAGGFGTTLMAKDLSLAQNASTNTQAPTPMGSLAHQIYRILARDPQYQAKDFGVVYQ 292          
BLAST of EY666165 vs. ExPASy Swiss-Prot
Match: MMSB_PSEAE (3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.047e-37
Identity = 85/216 (39.35%), Postives = 127/216 (58.80%), Query Frame = 2
Query:   17 RIPGRPRVRNISAAVSNCILK-EKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYA--KLCENGHDSKDFSCVFQHYYGGQD 655
            R+ G+P + + S        K  +  + +   +LDAPVSGGV  A AGTL+F+VGG  + +  A+P+  +MG+N  + G  G G  AKICNN+ + + M G +EAL LG   G+  + L++++  SS   W+ + YNP PGVM   PAS  Y GGF  +LM KDL LALA+A+ V    PL + A+++++     +  H+  DFS + Q  Y G+D
Sbjct:   84 RVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQSSGGNWALNLYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPLGALARNLFSLHAQADAEHEGLDFSSI-QKLYRGKD 298          
The following BLAST results are available for this feature:
BLAST of EY666165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
3HIDH_ARATH1.673e-9177.78Probable 3-hydroxyisobutyrate dehydrogenase, mitoc... [more]
3HIDH_PONAB5.261e-5355.103-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
3HIDH_HUMAN5.261e-5355.103-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
3HIDH_BOVIN5.261e-5358.523-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
3HIDH_MOUSE1.999e-5253.813-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
3HIDH_RAT5.817e-5253.303-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
3HIDH_DICDI4.314e-4754.02Probable 3-hydroxyisobutyrate dehydrogenase, mitoc... [more]
3HIDH_DROME3.652e-4648.47Probable 3-hydroxyisobutyrate dehydrogenase, mitoc... [more]
3HIDH_CAEEL2.449e-4248.30Probable 3-hydroxyisobutyrate dehydrogenase, mitoc... [more]
MMSB_PSEAE4.047e-3739.353-hydroxyisobutyrate dehydrogenase OS=Pseudomonas ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666165 ID=EY666165; Name=EY666165; organism=Citrus sinensis; type=EST; length=823bp
CATCTGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGAATATTT
CTGCAGCTGTATCTAATTGTATTCTAAAAGAAAAGAAAGATTCATGGGAA
AACCCTGTCATGTTGGATGCTCCCGTCTCTGGGGGTGTTCTTGCTGCAGA
GGCTGGTACACTAACTTTCATGGTTGGTGGCTCTGAGGATGCATATCAGG
CTGCAAAACCCTTGTTCCTCTCAATGGGGAAAAACACAATATACTGTGGT
GGAGCAGGAAATGGGGCGGCAGCAAAAATTTGCAATAACTTGACAATGGC
TGTGAGCATGCTTGGGGTGTCAGAAGCCCTGACACTTGGTCAGTCGCTAG
GAATATCTGCTAGTACTCTAACAAAGATATTGAACTCTTCAAGTGCTCGC
TGTTGGAGTAGTGACAGTTATAATCCTGTTCCTGGGGTGATGGAAGGGGT
GCCGGCTTCAAGGAATTATGGTGGTGGGTTTGCATCTAAGCTCATGGCCA
AAGACTTGAACCTTGCTTTGGCATCAGCAAAAGAGGTTGGCGTCGATTGC
CCGTTAACATCACAAGCACAAGACATATACGCGAAGCTCTGTGAGAATGG
ACATGATTCCAAGGACTTCTCCTGCGTTTTCCAGCATTATTATGGAGGGC
AGGATGAAGTTTAACTTCAACATTCCAGGACCCTGCTTTTTCCAATTCCT
TTCTGATTCTCTTGTAAAATCAAGGGCATTCAATCAAAAATTAACTTCCC
TAAGGGTCGTCCCCTTTTTCCAAAAAAAATTTGCCACTAAATAAAACCTT
TTTTCCCTTATTTTGAACAAAAA
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