CN189151

Overview
NameCN189151
Unique NameCN189151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_ARATH (V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.600e-75
Identity = 141/170 (82.94%), Postives = 158/170 (92.94%), Query Frame = 2
Query:  209 QNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            QN RL VVPTVTMLGVMK+RLVGATRGHALLKKKSDALTVQFR +LK IVT KESMG++MK SSFAL E KYVAG+N+KH+VLENV+ A++KVRSR ENIAGVK+PKF++F++GETKNDLTGLARGGQQV+ CR AYVKAIE+LVELASLQTSFLTLDEAIKTTNRRVNA
Sbjct:    4 QNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGDMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTGLARGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNA 173          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_SUBDO (V-type proton ATPase subunit D OS=Suberites domuncula GN=VATPD PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.608e-47
Identity = 94/172 (54.65%), Postives = 132/172 (76.74%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   R+ V P+   L +MK+RL GA +GH+LLK+K+DALT++FRQIL  I+ TK  MGEVMK+++F+L EAK+VAG+    +VL+NV  A I++ ++++N+AGV +P FE ++DG    +LTGL+RGGQ V +C+  + KA+ LLVELASLQT+F+TLDE IK TNRRVNA
Sbjct:    1 MSGKDRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMGEVMKEATFSLAEAKFVAGD-FSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSDGSDTYELTGLSRGGQLVSKCKEVFGKAVRLLVELASLQTAFVTLDEVIKVTNRRVNA 171          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_PONAB (V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.294e-46
Identity = 94/172 (54.65%), Postives = 130/172 (75.58%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNA 171          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_MOUSE (V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.294e-46
Identity = 94/172 (54.65%), Postives = 130/172 (75.58%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNA 171          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_HUMAN (V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.294e-46
Identity = 94/172 (54.65%), Postives = 130/172 (75.58%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNA 171          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_RABIT (V-type proton ATPase subunit D OS=Oryctolagus cuniculus GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.765e-46
Identity = 93/172 (54.07%), Postives = 129/172 (75.00%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+      ++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNA 171          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_BOVIN (V-type proton ATPase subunit D OS=Bos taurus GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.765e-46
Identity = 93/171 (54.39%), Postives = 129/171 (75.44%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVN 715
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAIK TNRRVN
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVN 170          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_DICDI (V-type proton ATPase subunit D OS=Dictyostelium discoideum GN=atp6v1d PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.388e-46
Identity = 95/174 (54.60%), Postives = 127/174 (72.99%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN--DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   RL + PT   L VMK++L GA  GH+LLKKKSDALT++FR+IL NIV  K+ MG  M+D+SF+L  AKY AGE   + V+ENV N +I V+   EN+AGV +P FE  ++G   N  +LTGL++GGQQ+ + R +++KA+E L+ LASLQT+F+TLDE IK TNRRVNA
Sbjct:    1 MSGKNRLNIFPTRMALTVMKTKLKGAVTGHSLLKKKSDALTIRFRRILANIVENKQLMGTTMRDASFSLAAAKYAAGE-FSNSVIENVSNPTIAVKMTTENVAGVHLPTFEKISEGVVSNSQELTGLSKGGQQINKSRESHIKAVEALIALASLQTAFITLDEVIKITNRRVNA 173          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD2_DROME (Probable V-type proton ATPase subunit D 2 OS=Drosophila melanogaster GN=CG8310 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.869e-45
Identity = 94/172 (54.65%), Postives = 126/172 (73.26%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            MA   RL + P+     +MKSRL GAT+GH LLKKK+DAL ++FR IL  I+ TK  MG+VMK+++F+L E K+  G+ I  IVL+NV  A IK+R++++N+AGV +P FE +TDG    +L GLARGGQQ+ + +  Y  A+ LLV+LASLQTSF+TLD+ IK TNRRVNA
Sbjct:    1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEAAFSLAEVKFTTGD-INQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNA 171          
BLAST of CN189151 vs. ExPASy Swiss-Prot
Match: VATD_MANSE (V-type proton ATPase subunit D OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.101e-45
Identity = 93/172 (54.07%), Postives = 124/172 (72.09%), Query Frame = 2
Query:  203 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNA 718
            M+   RL + P+     +MK RL GA +GH LLKKK+DAL V+FR IL  I+ TK  MGEVMK+++F+L EAK+  G+    +VL+NV  A IK+RS+++N+AGV +P FE + DG    +L GLARGGQQ+ + +  +  A++LLVELASLQTSF+TLDE IK TNRRVNA
Sbjct:    1 MSGKDRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGEVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNA 171          
The following BLAST results are available for this feature:
BLAST of CN189151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
VATD_ARATH8.600e-7582.94V-type proton ATPase subunit D OS=Arabidopsis thal... [more]
VATD_SUBDO2.608e-4754.65V-type proton ATPase subunit D OS=Suberites domunc... [more]
VATD_PONAB1.294e-4654.65V-type proton ATPase subunit D OS=Pongo abelii GN=... [more]
VATD_MOUSE1.294e-4654.65V-type proton ATPase subunit D OS=Mus musculus GN=... [more]
VATD_HUMAN1.294e-4654.65V-type proton ATPase subunit D OS=Homo sapiens GN=... [more]
VATD_RABIT3.765e-4654.07V-type proton ATPase subunit D OS=Oryctolagus cuni... [more]
VATD_BOVIN3.765e-4654.39V-type proton ATPase subunit D OS=Bos taurus GN=AT... [more]
VATD_DICDI8.388e-4654.60V-type proton ATPase subunit D OS=Dictyostelium di... [more]
VATD2_DROME1.869e-4554.65Probable V-type proton ATPase subunit D 2 OS=Droso... [more]
VATD_MANSE7.101e-4554.07V-type proton ATPase subunit D OS=Manduca sexta PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001G10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189151 ID=CN189151; Name=CN189151; organism=Citrus sinensis; type=EST; length=719bp
GAGGAGAACCTCTCATCTACTCTTCCTCTCAAAAAACCACCAGTGTCAGT
TCTGGACCCTCTTAAATTTTTCTCGCTAATTTTCTCTGGAGCCAAATTCG
ATATTTCACTTAAACCGGAGTTAGGGTTCCATTTGATCTCATCGGATCGG
CCTTTCGCGGAATCTTAAACTCCCTAATATTTGGATCAGATAATTTGGAA
AGATGGCGCAAAACCAGCGGTTGACTGTGGTTCCCACAGTGACAATGCTA
GGGGTTATGAAAAGTAGGCTTGTTGGTGCTACAAGAGGGCATGCCCTTTT
GAAGAAGAAGAGTGATGCTTTAACTGTTCAGTTTCGTCAGATCCTTAAGA
ATATCGTGACTACGAAGGAATCGATGGGAGAAGTTATGAAAGATTCTTCC
TTTGCCCTGATTGAGGCCAAGTATGTTGCTGGCGAAAACATCAAGCACAT
TGTTCTTGAGAATGTGCAAAATGCTTCTATTAAAGTTCGATCCCGTCAAG
AGAATATTGCAGGTGTTAAGATTCCAAAGTTTGAGTACTTCACTGATGGC
GAGACCAAGAATGATCTTACAGGATTGGCTAGAGGTGGGCAACAAGTGCA
ACAGTGTCGTGCTGCTTATGTGAAAGCCATTGAGCTTCTTGTCGAGCTTG
CTTCTCTTCAAACTTCATTTTTGACACTGGATGAGGCGATTAAGACCACA
AACCGCAGGGTTAATGCTT
back to top