EY666157

Overview
NameEY666157
Unique NameEY666157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY666157_ssr183 microsatellite EY666157_ssr183:183..194. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 6.075e-107
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 3
Query:   30 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVE FFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP
Sbjct:    1 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 181          

HSP 2 Score: 34.2686 bits (77), Expect = 6.075e-107
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  584 GCPTSRYIYADELIDV 631
            G PTSRYIYADELIDV
Sbjct:  185 GMPTSRYIYADELIDV 200          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 9.803e-72
Identity = 130/183 (71.04%), Postives = 151/183 (82.51%), Query Frame = 3
Query:   27 TMTRLASGV-LITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            TMTR++ GV L  LLV+L  ++  +R    D++KLPS+A RFF         NDDD + GTRWAVL+AGS+G+WNYRHQADICHAYQLLRKGGLK+ENI+VFMYDDIA N ENPRPG IIN PHG DVY+GVPKDYTG+DV V+N FAV+LG+KTA+ GGSGKVVDSGPNDHIFIFYSDHGGP
Sbjct:    4 TMTRVSVGVVLFVLLVSLVAVS-AARSGPDDVIKLPSQASRFFRPAE-----NDDDSNSGTRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGP 180          

HSP 2 Score: 25.0238 bits (53), Expect = 9.803e-72
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  584 GCPTSRYIYADELIDV 631
            G PTS Y+YA++L DV
Sbjct:  184 GMPTSPYLYANDLNDV 199          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.110e-69
Identity = 120/180 (66.67%), Postives = 145/180 (80.56%), Query Frame = 3
Query:   33 TRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            ++L++ +  T++V    +    RD+ GD L+LPSE  RFF       +  +DDD  GTRWA+LLAGSNG+WNYRHQ+D+CHAYQLLRKGG K+ENIIVFMYDDIA NEENPRPGVIIN P GDDVY GVPKDYTG +V  +NF+A +LGNK+ALTGGSGKVVDSGPNDHIF++Y+DHGGP
Sbjct:    4 SQLSTLLFFTIVVTFLTVVSSGRDLPGDYLRLPSETSRFFR------EPKNDDDFEGTRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGP 177          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.562e-67
Identity = 122/180 (67.78%), Postives = 141/180 (78.33%), Query Frame = 3
Query:   33 TRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            T   + +L  LL+ L  +    RD+ GD L+LPS++       G G  V+      GTRWA+L AGS+G+WNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFN ENPR GVIIN P+GD+VYKGVPKDYTGEDVT  NF+A +LG+K+ LTGGSGKVV+SGPNDHIFIFYSDHGGP
Sbjct:    4 TTATTSLLALLLLFLVALVSAGRDLVGDFLRLPSDS-------GNGDNVH------GTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGP 170          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.787e-64
Identity = 113/156 (72.44%), Postives = 135/156 (86.54%), Query Frame = 3
Query:  105 IAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            ++GD++KLPS A +FF          +DDDS  T+WAVL+AGS+G+WNYRHQAD+CHAYQLL+KGG+K+ENI+VFMYDDIA NEENPRPGVIIN P+G+DVY GVPKDYTG++V V+N  AV+LGNKTAL GGSGKVVDSGPNDHIFI+YSDHGGP
Sbjct:   18 VSGDVIKLPSLASKFFR------PTENDDDS--TKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGP 165          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.578e-59
Identity = 104/130 (80.00%), Postives = 117/130 (90.00%), Query Frame = 3
Query:  183 DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            DDDD +GTRWAVL+AGS GF NYRHQAD+CHAYQLLRKGGLK+ENIIVFMYDDIA NE NPRPGVIINHP G+DVY GVPKDYTGE VT +N +AV+LG+K+A+ GGSGKVVDS PND IF++YSDHGGP
Sbjct:   54 DDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLYYSDHGGP 183          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.156e-57
Identity = 99/128 (77.34%), Postives = 113/128 (88.28%), Query Frame = 3
Query:  189 DDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            DD VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA+N  NPRPGVIINHP G DVY GVPKDYTGEDVT EN +AV+LG+K+ + GGSGKV++S P D IFIFYSDHGGP
Sbjct:   34 DDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPEDRIFIFYSDHGGP 161          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.372e-56
Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 3
Query:   51 VLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            +++ L+      A  +R     ++KLP+E             V+ D D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGGLK+ENI+VFMYDDIA NE NPR GVIINHP G+D+Y GVPKDYTG++VT EN FAV+LG+K+ L GGSGKV++S P D IFI+YSDHGGP
Sbjct:   20 MMVVLVRVHGAAARPNRKEWDSVIKLPTEP------------VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIYYSDHGGP 181          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.284e-54
Identity = 101/173 (58.38%), Postives = 131/173 (75.72%), Query Frame = 3
Query:   54 LITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            ++ +++ + G     +D    ++KLP++            +V+ + D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA +E NPRPGVIIN+P G DVY GVPKDYTGE VT  NFFAV+LG+K+ + GGSGKV++S P D IF++YSDHGGP
Sbjct:   22 MLVMVMRIQGTNGKEQD---SVIKLPTQ------------EVDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVYYSDHGGP 179          
BLAST of EY666157 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.677e-54
Identity = 93/131 (70.99%), Postives = 113/131 (86.26%), Query Frame = 3
Query:  180 NDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 572
            + D+D VGTRWAVL+AGS+G+ NYRHQAD+CHAYQ+LRKGGLK+ENI+V MYDDIA +  NPRPG +INHP GDDVY GVPKDYTG  VT  NF+AV+LG++ A+ GGSGKV+ S PNDHIF++Y+DHGGP
Sbjct:   42 DQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGP 172          
The following BLAST results are available for this feature:
BLAST of EY666157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
VPE_CITSI6.075e-10799.45Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH9.803e-7271.04Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA4.110e-6966.67Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU6.562e-6767.78Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH1.787e-6472.44Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO6.578e-5980.00Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
LEGU_CANEN6.156e-5777.34Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_SOYBN1.372e-5660.92Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.284e-5458.38Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH1.677e-5470.99Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-F12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666157 ID=EY666157; Name=EY666157; organism=Citrus sinensis; type=EST; length=838bp
CAGCAACCAATCAACCCCCTTCAAAAACCATGACGCGCCTTGCCTCCGGC
GTGCTAATCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCAG
AGACATAGCAGGTGACATTCTGAAGCTACCATCGGAAGCCTATAGGTTCT
TCCATAATGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGTC
GGCACGAGATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATTA
CAGGCATCAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGTG
GGCTGAAGGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTTTC
AATGAAGAGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCGA
TGATGTTTACAAAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACTG
TTGAAAACTTTTTTGCTGTTGTCCTGGGAAATAAAACAGCTCTTACAGGG
GGCAGTGGGAAGGTTGTGGATAGCGGCCCCAATGATCATATTTTCATATT
CTACTCAGATCATGGTGGCCCCTGGGGGGCTAGGGATGCCCCACCAGTCG
ATACATATATGCTGATGAACTGATCGATGTCTTAAAAAAAAAAACCTGGC
TCCTGGGAACTACAAAAGCTTTGGAATTTTATCCCCGAAGCCCGGTGATC
TGGGAAGAATCTTTGAGGGGCTCTCTCTCCGGGGGTTTAAAAATTCTATG
GAAACCAAAGGTTCCCACAGGCTGAACAAACCCATGTGGGGGACACACTT
GGCCCGGTAAAGAACTTCCGGCTCTCCCCCCCGCAAAA
back to top