CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SCHPO (Guanylate kinase OS=Schizosaccharomyces pombe GN=SPBC1198.05 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            + A++ +    K+ ILDID+QG   VKASP+DA ++F+ PPS+E+LE RLR RGTE E  IL+RL  A+ EI+  +  G FD ++ ND +E+ Y+ L+
Sbjct:   99 IMAIQELEAVNKKAILDIDLQGVLQVKASPIDAQYVFLAPPSIEQLEVRLRGRGTENESAILQRLERARAEIEYSEKPGNFDALIVNDDVEKAYKQLE 196          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_MOUSE (Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20
Identity = 46/100 (46.00%), Postives = 69/100 (69.00%), Query Frame = -2
Query:  414 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHL 713
            EAV AV    + C+LD+D+QG RS+K + L  I+IF+ PPS++ LE+RLR R TETE+ + KRL  A+ +++  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:   86 EAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQAL 185          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_PIG (Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = -2
Query:  384 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLG--LDGSIATNH 710
            AV AV    + C+LD+D+QG R++K + L  I+IF+ PPS++ LE+RLR R TETE+ + KRL  AK +++  K  G+FD I+ ND L++ Y  LK+ L   +  + AT H
Sbjct:   87 AVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEALSEEIKKAQATGH 197          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_HUMAN (Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19
Identity = 44/99 (44.44%), Postives = 69/99 (69.70%), Query Frame = -2
Query:  414 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHL 710
            AV+AV    + C+LD+D+QG R++KA+ L  I+I + PPS+  LE+RLR R TETE+ ++KRL  A+ +++  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:   87 AVQAVQAMNRICVLDVDLQGVRNIKATDLRPIYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQADMESSKEPGLFDVVIINDSLDQAYAELKEAL 185          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_YEAST (Guanylate kinase OS=Saccharomyces cerevisiae GN=GUK1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASP-LDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            V +V+ V+ +GK CILDID+QG +SVKA P L+A F+FI PPS+E+L++RL  RGTETE+ I KRL  A+ E+   + +G  D ++ ND L++ Y+ LK
Sbjct:   83 VASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAE-TGAHDKVIVNDDLDKAYKELK 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_BOVIN (Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19
Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = -2
Query:  414 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHL 710
            AV AV    + C+LD+D+QG R++K + L  I+IF+ PPS++ LE+RLR R TETE+ + KRL  A+ +++  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:   87 AVRAVQAMNRICVLDVDLQGVRNIKKTDLRPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAARADMESSKEPGLFDLIIVNDSLDKAYWALKEAL 185          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_DICDI (Guanylate kinase OS=Dictyostelium discoideum GN=guk1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.479e-18
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = -2
Query:  423 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 713
            +A++ V+D  K CILDIDVQG  SVK + +   FIFI PP+ E L+ERL  RGTE E+ + KRL  AK+E+      G FDH++ N+ L+  Y  LK
Sbjct:   91 KALKDVSDKNKICILDIDVQGCESVKKANIPCKFIFISPPTFETLQERLIGRGTENEETLKKRLETAKKEMVYRDIPGFFDHVIVNNVLDVAYGELK 187          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_DESVH (Guanylate kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gmk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            ++A   + D G+  + DIDVQGAR ++AS     ++FI PPS +ELE RLRARGT+ E+ I +RL NA +E+++ +    FD  + ND LE  Y+ L+
Sbjct:   87 LKATLDLLDEGRDVLFDIDVQGARQLRASLQRGRYVFIMPPSRDELEHRLRARGTDDEETIARRLANAAKELREARR---FDAWIVNDDLERAYDELR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SYNS9 (Guanylate kinase OS=Synechococcus sp. (strain CC9902) GN=gmk PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = -2
Query:  408 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGL 713
            + VE    AG+  +L+I+++GAR V+ S  DA  +F+ PPS  ELE R+R RGT+TED I +RL  A+EE+    +   FD ++ ND L++  + L+ H+ L
Sbjct:   86 DPVEEHLAAGRPVLLEIELEGARQVRTSFPDAFQVFLAPPSFAELERRIRGRGTDTEDAIQRRLARAREEL---NAQNEFDAVVVNDDLDQALKQLETHMQL 184          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_BACSK (Guanylate kinase OS=Bacillus clausii (strain KSM-K16) GN=gmk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 42/98 (42.86%), Postives = 66/98 (67.35%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            ++ V+   +AGK  IL+I+VQGA+ V+    + +FIF+ PPS++EL +R+  RGTETED I +R+  AKEEI       ++D+++ NDK+E   E +K
Sbjct:   86 IDYVQETINAGKDIILEIEVQGAQKVRTVFPEGVFIFLAPPSLKELRDRIVGRGTETEDIINERMTVAKEEI---DLMTMYDYVVENDKVEWAVERIK 180          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_SCHPO2.064e-2046.94Guanylate kinase OS=Schizosaccharomyces pombe GN=S... [more]
KGUA_MOUSE2.696e-2046.00Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2[more]
KGUA_PIG6.005e-2044.14Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2[more]
KGUA_HUMAN1.747e-1944.44Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2[more]
KGUA_YEAST2.282e-1950.51Guanylate kinase OS=Saccharomyces cerevisiae GN=GU... [more]
KGUA_BOVIN2.980e-1945.45Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2[more]
KGUA_DICDI1.479e-1848.45Guanylate kinase OS=Dictyostelium discoideum GN=gu... [more]
KGUA_DESVH6.871e-1643.88Guanylate kinase OS=Desulfovibrio vulgaris (strain... [more]
KGUA_SYNS91.999e-1541.18Guanylate kinase OS=Synechococcus sp. (strain CC99... [more]
KGUA_BACSK5.816e-1542.86Guanylate kinase OS=Bacillus clausii (strain KSM-K... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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