CN182543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182543 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 52/124 (41.94%), Postives = 84/124 (67.74%), Query Frame = -1 Query: 216 NLISWSSRKQQTVARSSTEAEYRSVAATAAELRWVCSLLAELGVTLQSSLVVYCDNIGATQLSSNPVFHSRMKHVAVDYHFICEQVQSGLLRVAHVSSADQLADLLTKPLPRSQFLLLRDKIGL 587 NLI W++++Q +VA SSTEAEY ++ E W+ LL + + L++ + +Y DN G +++NP H R KH+ + YHF EQVQ+ ++ + ++ + +QLAD+ TKPLP ++F+ LRDK+GL Sbjct: 1277 NLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400
BLAST of CN182543 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.000e-22 Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = -1 Query: 216 LSILGGNLISWSSRKQQTVARSSTEAEYRSVAATAAELRWVCSLLAELGVTLQSSLVVYCDNIGATQLSSNPVFHSRMKHVAVDYHFICEQVQSGLLRVAHVSSADQLADLLTKPLPRSQFLLLRDKIGL 605 L G ISW S+ Q+ VA S+TEAEY + T E+ W+ L ELG+ Q VVYCD+ A LS N ++H+R KH+ V YH+I E V L+V +S+ + AD+LTK +PR++F L ++ +G+ Sbjct: 1197 LFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325 The following BLAST results are available for this feature:
BLAST of CN182543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182543 ID=CN182543; Name=CN182543; organism=Citrus sinensis; type=EST; length=677bpback to top |