CN189096

Overview
NameCN189096
Unique NameCN189096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:28..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 8.032e-82
Identity = 135/161 (83.85%), Postives = 148/161 (91.93%), Query Frame = 3
Query:   24 MTRLASGVLITLLVALAGIADGSRDMAGDILRLPSEAYRFFHNGGGGARVNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            MTRLASGVLITLLVALAGIADGSRD+AGDIL+LPSEAYRFFHNGGGGA+VN+DDDSVG RWA LLAGSNGFWNYR  ADICHAYQL+RKGGLKDENIIVFMYDD+A +E+NPRPGVIIN PHGDDVYKGVP+D  GEDVTVE FFAV+LG+KT+   G G+
Sbjct:    1 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGK 161          

HSP 2 Score: 39.2762 bits (90), Expect = 8.032e-82
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            L G  G++  SGPNDHI +F S+HGGP
Sbjct:  155 LTGGSGKVVDSGPNDHIFIFYSDHGGP 181          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.841e-53
Identity = 94/163 (57.67%), Postives = 121/163 (74.23%), Query Frame = 3
Query:   21 TMTRLASGV-LITLLVALAGIADGSRDMAGDILRLPSEAYRFFHNGGGGARVNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            TMTR++ GV L  LLV+L  ++  +R    D+++LPS+A RFF         N+DD + G RWA L+AGS+G+WNYR  ADICHAYQL+RKGGLK+ENI+VFMYDD+A + +NPRPG IIN PHG DVY+GVP+D  G+DV V+N FAVILG KT+   G G+
Sbjct:    4 TMTRVSVGVVLFVLLVSLVAVS-AARSGPDDVIKLPSQASRFFRPAE-----NDDDSNSGTRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGK 160          

HSP 2 Score: 38.891 bits (89), Expect = 1.841e-53
Identity = 15/27 (55.56%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            ++G  G++  SGPNDHI +F S+HGGP
Sbjct:  154 VKGGSGKVVDSGPNDHIFIFYSDHGGP 180          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.668e-51
Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 3
Query:   27 TRLASGVLITLLVALAGIADGSRDMAGDILRLPSEAYRFFHNGGGGARVNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            ++L++ +  T++V    +    RD+ GD LRLPSE  RFF           DDD  G RWA LLAGSNG+WNYR  +D+CHAYQL+RKGG K+ENIIVFMYDD+A +E+NPRPGVIIN+P GDDVY GVP+D  G +V  +NF+A +LG+K++   G G+
Sbjct:    4 SQLSTLLFFTIVVTFLTVVSSGRDLPGDYLRLPSETSRFFREP------KNDDDFEGTRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGK 157          

HSP 2 Score: 36.5798 bits (83), Expect = 1.668e-51
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            L G  G++  SGPNDHI ++ ++HGGP
Sbjct:  151 LTGGSGKVVDSGPNDHIFVYYTDHGGP 177          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.230e-50
Identity = 88/160 (55.00%), Postives = 109/160 (68.12%), Query Frame = 3
Query:   27 TRLASGVLITLLVALAGIADGSRDMAGDILRLPSEAYRFFHNGGGGARVNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            T   + +L  LL+ L  +    RD+ GD LRLPS++       G G  V+      G RWA L AGS+G+WNYR  ADICHAYQL+RKGGLKDENIIVFMYDD+A + +NPR GVIIN P+GD+VYKGVP+D  GEDVT  NF+A +LG K+    G G+
Sbjct:    4 TTATTSLLALLLLFLVALVSAGRDLVGDFLRLPSDS-------GNGDNVH------GTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGK 150          

HSP 2 Score: 39.2762 bits (90), Expect = 5.230e-50
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            L G  G++  SGPNDHI +F S+HGGP
Sbjct:  144 LTGGSGKVVNSGPNDHIFIFYSDHGGP 170          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 8.718e-47
Identity = 77/136 (56.62%), Postives = 106/136 (77.94%), Query Frame = 3
Query:   99 MAGDILRLPSEAYRFFHNGGGGARVNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            ++GD+++LPS A +FF       R  E+DD    +WA L+AGS+G+WNYR  AD+CHAYQL++KGG+K+ENI+VFMYDD+A +E+NPRPGVIIN P+G+DVY GVP+D  G++V V+N  AVILG+KT+   G G+
Sbjct:   18 VSGDVIKLPSLASKFF-------RPTENDDD-STKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGK 145          

HSP 2 Score: 38.891 bits (89), Expect = 8.718e-47
Identity = 15/27 (55.56%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            L+G  G++  SGPNDHI ++ S+HGGP
Sbjct:  139 LKGGSGKVVDSGPNDHIFIYYSDHGGP 165          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.568e-42
Identity = 72/110 (65.45%), Postives = 88/110 (80.00%), Query Frame = 3
Query:  177 EDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            +DDD +G RWA L+AGS GF NYR  AD+CHAYQL+RKGGLK+ENIIVFMYDD+A +E NPRPGVIIN P G+DVY GVP+D  GE VT +N +AV+LG K++   G G+
Sbjct:   54 DDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGK 163          

HSP 2 Score: 33.8834 bits (76), Expect = 1.568e-42
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            +QG  G++  S PND I L+ S+HGGP
Sbjct:  157 VQGGSGKVVDSKPNDRIFLYYSDHGGP 183          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.082e-40
Identity = 77/154 (50.00%), Postives = 102/154 (66.23%), Query Frame = 3
Query:   45 VLITLLVALAGIADGSRDMAGDILRLPSEAYRFFHNGGGGARVNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            +++ L+      A  +R     +++LP+E             V+ D D VG RWA L+AGSNG+ NYR  AD+CHAYQL+ KGGLK+ENI+VFMYDD+A +E NPR GVIIN P G+D+Y GVP+D  G++VT EN FAVILG K+    G G+
Sbjct:   20 MMVVLVRVHGAAARPNRKEWDSVIKLPTEP------------VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGK 161          

HSP 2 Score: 30.4166 bits (67), Expect = 1.082e-40
Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            L+G  G++  S P D I ++ S+HGGP
Sbjct:  155 LKGGSGKVINSKPEDRIFIYYSDHGGP 181          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.083e-40
Identity = 71/108 (65.74%), Postives = 84/108 (77.78%), Query Frame = 3
Query:  183 DDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            DD VG RWA L+AGSNG+ NYR  AD+CHAYQL+ KGG+K+ENI+VFMYDD+A +  NPRPGVIIN P G DVY GVP+D  GEDVT EN +AVILG K+    G G+
Sbjct:   34 DDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGK 141          

HSP 2 Score: 31.187 bits (69), Expect = 1.083e-40
Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            ++G  G++  S P D I +F S+HGGP
Sbjct:  135 VKGGSGKVINSNPEDRIFIFYSDHGGP 161          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.990e-40
Identity = 71/112 (63.39%), Postives = 85/112 (75.89%), Query Frame = 3
Query:  171 VNEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            V+ + D VG RWA L+AGSNG+ NYR  AD+CHAYQL+ KGG+K+ENI+VFMYDD+A  E NPRPGVIIN P G DVY GVP+D  GE VT  NFFAV+LG K+    G G+
Sbjct:   48 VDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGK 159          

HSP 2 Score: 28.8758 bits (63), Expect = 8.990e-40
Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            ++G  G++  S P D I ++ S+HGGP
Sbjct:  153 VKGGSGKVINSKPEDRIFVYYSDHGGP 179          
BLAST of CN189096 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 2.591e-39
Identity = 65/111 (58.56%), Postives = 84/111 (75.68%), Query Frame = 3
Query:  174 NEDDDSVGARWAGLLAGSNGFWNYRRHADICHAYQLVRKGGLKDENIIVFMYDDVALDEQNPRPGVIINRPHGDDVYKGVPEDDAGEDVTVENFFAVILGSKTSSYRGQGE 506
            ++D+D VG RWA L+AGS+G+ NYR  AD+CHAYQ++RKGGLK+ENI+V MYDD+A    NPRPG +IN P GDDVY GVP+D  G  VT  NF+AV+LG + +   G G+
Sbjct:   42 DQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGK 152          

HSP 2 Score: 33.8834 bits (76), Expect = 2.591e-39
Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  488 LQGAGGRLWISGPNDHILLFGSNHGGP 568
            ++G  G++  S PNDHI ++ ++HGGP
Sbjct:  146 VKGGSGKVIASKPNDHIFVYYADHGGP 172          
The following BLAST results are available for this feature:
BLAST of CN189096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VPE_CITSI8.032e-8283.85Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH1.841e-5357.67Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA1.668e-5154.38Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU5.230e-5055.00Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH8.718e-4756.62Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.568e-4265.45Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN1.082e-4050.00Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
LEGU_CANEN1.083e-4065.74Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE2_PHAVU8.990e-4063.39Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH2.591e-3958.56Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E24_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189096 ID=CN189096; Name=CN189096; organism=Citrus sinensis; type=EST; length=570bp
GGAATCCACCCCCTTCGAAAACCATGACGCGCCTTGCCTCCGGCGTGCTA
ATCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCAGAGACAT
GGCAGGTGACATTCTGAGGCTACCATCGGAAGCCTATAGGTTCTTCCATA
ATGGTGGGGGAGGGGCAAGGGTCAACGAGGATGATGATTCTGTCGGCGCG
AGATGGGCCGGCCTGCTTGCCGGATCTAATGGCTTCTGGAATTACAGGCG
TCATGCTGATATTTGTCATGCTTATCAGCTCGTGAGGAAAGGTGGGCTGA
AGGATGAAAATATTATTGTTTTCATGTATGATGACGTCGCTTTGGATGAA
CAGAACCCAAGGCCTGGAGTCATCATTAACCGGCCCCATGGCGATGATGT
TTACAAAGGAGTTCCAGAGGATGACGCGGGGGAAGATGTTACTGTTGAAA
ACTTTTTTGCTGTTATCCTGGGAAGTAAAACGAGCTCTTACAGGGGGCAG
GGGGAAGGTTGTGGATTAGCGGCCCCAATGATCATATTTTGCTGTTCGGC
TCCAATCATGGTGGCCCTGG
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