CN182483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.519e-45 Identity = 87/179 (48.60%), Postives = 123/179 (68.72%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 VPD SGK E+QY H++A + ++I L SP ++ + G ++A G + +DT +GNFTK AG+S + D AS+ L DKGDT+ ASY H + + +A E+T FS+NENT T+G + +D LT VKA++N++GK AL+QHE PKSL TIS EVDT+A+EK+ + GLA+ALKP Sbjct: 98 VPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.003e-45 Identity = 89/179 (49.72%), Postives = 120/179 (67.04%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 VPD SGK EVQY HD+A + +++ L +P ++ + +GT IA G + +DT +G+FTK AG+S T D AS+ L +KGD + ASY H + L +A E+ FSTNEN TVG + +D LT VKA++NN GK ALLQHE PKSL T+S EVDTK+++K +FGLA+ALKP Sbjct: 98 VPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALALKP 276
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.337e-44 Identity = 89/179 (49.72%), Postives = 127/179 (70.95%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 VPD SGK+E+QY HD+A + ++I L SP +++++ GT ++A GA+ DT +GN TKY AG+S + D AS+ L +KGD++ ASY +H+ N +A E+T FS+NEN+ T G + +D LTVVKA+ NN GK ALLQHE PKS+ TIS+EVDTKA++K+ + G+A+ALKP Sbjct: 97 VPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASY-YHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVALKP 274
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.891e-44 Identity = 90/180 (50.00%), Postives = 126/180 (70.00%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVG-EITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 VPD SGK E+QY HD+A + ++I L +P ++++ GT ++A GA+ DT + NF KY A +S T D AS+ L +KGD++ ASY H ++ K AVG E+T FS+NEN+ T G + +D LT+VKA++NN GK AL+QHE +PKSL TIS+EVDTKA+EK+ + G+AIALKP Sbjct: 98 VPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVE--KSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIALKP 275
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 5.082e-44 Identity = 86/179 (48.04%), Postives = 124/179 (69.27%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 VP+ SGK E+QY H++A + S++ L +P ++ ++ IGT ++AFGA+ +DT G TK A ++ K D S+ L +KGD + ASY H ++ L +A +I+ RFST ENTFT+G +A+D LT VK ++ N GK AL+QHE PKSL+TISSEVDTKA+EK+ + GL++ALKP Sbjct: 98 VPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLSLALKP 276
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 3.642e-42 Identity = 83/179 (46.37%), Postives = 124/179 (69.27%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 VPD NSGK E+QY H++A + +++ L Q+P ++ + IG+ +A G + +DT SGNFTK AG+S TK D AS+ + DKGD + ASY H ++ L +A E++ + S+ ++T TVG +++D LT VKA++N+ G AL+QHE PKS TIS EVDTK+++K+ + GLA+ALKP Sbjct: 98 VPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.998e-40 Identity = 82/180 (45.56%), Postives = 119/180 (66.11%), Query Frame = -3 Query: 222 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVG-EITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALKP 758 +PD+ SGK EVQYFHD+A + +++ +P ++ + +GT ++ G + Y+T SGNF + AG + TK D AS+IL DKG+ + ASY + S VG EI+ F+T EN TVG +A+D LT VKA++NN G AL+QHE PKS T+S EVD+KA++K+ + G+A+ALKP Sbjct: 98 LPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASY---YQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274
BLAST of CN182483 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.107e-38 Identity = 73/178 (41.01%), Postives = 116/178 (65.17%), Query Frame = -3 Query: 225 VPDYNSGKWEVQYFHDHATLLSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEVDTKALEKTPRFGLAIALK 758 VPD SGK E QY H++A + +++ LN +P ++++ G+ +++ G + +DT + +FTKY A +S+T PD AS+ L + GDT+ ASY H + N +A E++ S NE+T G +++D T +K + NN+G AL+QHE PKS +TIS +VDTKA+EK+ + GL++ LK Sbjct: 99 VPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVLK 276 The following BLAST results are available for this feature:
BLAST of CN182483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182483 ID=CN182483; Name=CN182483; organism=Citrus sinensis; type=EST; length=760bpback to top |