CN182482

Overview
NameCN182482
Unique NameCN182482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11382 contig Csv1_Contig11382:69..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADAL_HUMAN (Adenosine deaminase-like protein OS=Homo sapiens GN=ADAL PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 96/253 (37.94%), Postives = 148/253 (58.50%), Query Frame = 2
Query:   56 KMEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSD-RSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEM---RDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPN-KEEIQSMLDFLPQRIGH 799
            K ++++ +PKVELHAHLNGSI   T+ +L   + +K  +   D   VI K   R+L E F++F  IH LT+    +  +T++V+++FA + + YLELR+TP+R  + GM+K++Y+++++EG++     ++D                            I VR L+++DRR     A ETVKLA E     +  V+G+DLSG+PT G+   FL  L  A++ GL++ LH  EIPN K+E Q +LD LP RIGH
Sbjct:   11 KTDFYSELPKVELHAHLNGSISSHTMKKL---IAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLD----------------------------IDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSGDPTVGQAKDFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGH 232          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADAL_BOVIN (Adenosine deaminase-like protein OS=Bos taurus GN=ADAL PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38
Identity = 95/253 (37.55%), Postives = 149/253 (58.89%), Query Frame = 2
Query:   56 KMEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSD-RSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEM---RDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPN-KEEIQSMLDFLPQRIGH 799
            K  +++ +PKVELHAHLNGSI  +T+ +L   + +K  +   D   +I K + R+L E  ++F +IH+LTT    V  +T++V+++FA + + YLELR+TP+  ++ GM+K++Y+++++EG++     +VD                            I VR L+SIDRR  + AA E VKLA E     +  V+G+DLSG+P+ G+   FL  L  A++ GL++ LH  EIPN K E Q +L+  P RIGH
Sbjct:   10 KTTFYSKLPKVELHAHLNGSISSNTIRKL---IAKKPDLKIHDQMTMIDKGEKRTLEECLQMFQIIHLLTTTPEDVLMVTKDVIKEFADDGVKYLELRSTPRGEDATGMTKKTYVESILEGIKQSKEENVD----------------------------IDVRYLISIDRRGGSSAAKEAVKLAEEFFLSAEDTVLGLDLSGDPSAGQAKDFLEPLLEAKKSGLKLALHLSEIPNQKTETQVLLNLFPDRIGH 231          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADAL_MOUSE (Adenosine deaminase-like protein OS=Mus musculus GN=Adal PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.031e-37
Identity = 92/252 (36.51%), Postives = 145/252 (57.54%), Query Frame = 2
Query:   56 KMEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEM---RDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE-EIQSMLDFLPQRIGH 799
            K +++  +PKVELHAHLNGSI  ST+ +L  +  +  + V   +  +     R+L E F++F +IH LTT    +  +T++V+++FA + + YLELR+TP+   + GM++++Y+++V+EG++     ++D                            I VR L++IDRR     A ETV+LA E     +  V+G+DLSG+PT G+   FL  L  A++ GL++ LH  EIPN+E E Q +L  LP RIGH
Sbjct:   10 KTDFYLQLPKVELHAHLNGSISSSTMKKL--IAKKPHLNVHGHMTMIDKGKKRTLQECFQMFQVIHQLTTSAEDILMVTKDVIKEFADDGVKYLELRSTPREENATGMTRKTYVESVLEGIKQCKQENLD----------------------------IDVRYLMAIDRRGGPTIARETVELAKEFFLSTENTVLGLDLSGDPTIGQANDFLEPLLEAKKAGLKLALHLAEIPNREKENQMLLSLLPDRIGH 231          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADAL_DROPS (Adenosine deaminase-like protein OS=Drosophila pseudoobscura pseudoobscura GN=GA11319 PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.106e-34
Identity = 96/251 (38.25%), Postives = 134/251 (53.39%), Query Frame = 2
Query:   62 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDV--EHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLG---VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH 799
            ++   MPKVELHAHLNGS+  ++L +LA  +       FS +    V  + D +L + F+ F  +H LT+  A +   T+ V+ DFA++NI YLELRTTPK N++    +R Y+  V++ ++                             +  +   I V+LL SI+R E    A ETV LALE        VVGIDLSG PTKG++T F  AL  AR +GL++ +HC EI N  EI+ ML F   R GH
Sbjct:    3 KFLKEMPKVELHAHLNGSLNTNSLQDLAEKVYGNTSEEFSHLCARFVNFEKDSNLDKCFEKFAFVHELTSTAAGLQYATELVIRDFANDNIQYLELRTTPKANKNY--LRRDYLRIVLDTIKR----------------------------SRKKYPNILVKLLPSINRSEPVAVAEETVALALEFAKTDPDLVVGIDLSGIPTKGKFTDFCGALDLARREGLKLVIHCAEIDNPPEIKEMLSFGMSRCGH 223          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADALA_XENLA (Adenosine deaminase-like protein A OS=Xenopus laevis GN=adal-A PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.919e-34
Identity = 92/255 (36.08%), Postives = 145/255 (56.86%), Query Frame = 2
Query:   59 MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSD----RSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEM---RDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK-EEIQSMLDFLPQRIGH 799
            ++++  +PKVELHAHLNGSI  +T+ +L   +  K  +   D++H +   D    R+L E F++F +IH +T     +  +T++V+++FA++ + YLELR+TP R+   G++K++Y++ V+EG++      VD                            I VR LL+IDRR    AA ETVKLA +     +  V+G+DLSG+PT G    F+  L  AR+ GL++ LH  EIP++ EE + +L   P RIGH
Sbjct:    7 LQFYRDLPKVELHAHLNGSISTATMKKL---MARKPHL---DIQHGMTMIDKGQKRTLEECFQMFKIIHQITDTAEDILLVTKDVIKEFAADGVKYLELRSTP-RDTPAGLTKQAYVETVLEGIKQCKEEGVD----------------------------IDVRFLLAIDRRGGPTAAKETVKLAEDFFCSSNELVLGLDLSGDPTVGHGRDFMEPLNKARQSGLKLALHLSEIPSQTEETELLLGLPPDRIGH 226          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADAL_DROME (Adenosine deaminase-like protein OS=Drosophila melanogaster GN=Ada PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 85/249 (34.14%), Postives = 130/249 (52.21%), Query Frame = 2
Query:   62 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLG---VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH 799
            ++   +PKVELHAHLNGS+   +L +L   L       F  +     + ++ +   F+ F  +H LT+    +   T+  + DFA +N+ Y+E+RTTPK NE+   S+R Y+  V++ ++A S    +                            I V+LL SI+R E  + A ETV LA+E+       ++GIDLSGNP KG ++ F P L  AR++GL++ +HC EI N  E++ ML F   R GH
Sbjct:    3 QFLKGLPKVELHAHLNGSLGIKSLCDLGERLYGTSCKDFLKLCAHFSRFEKDMDACFEKFAFVHELTSTREGLRFATELAIRDFAEDNVQYVEMRTTPKANENY--SRRDYLQIVIDAIKAASETYPE----------------------------ITVKLLPSINRAEPVDVAEETVSLAVELARAHPNLILGIDLSGNPGKGRFSDFAPILAQARDKGLKLAIHCAEIENPSEVKEMLHFGMSRCGH 221          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADAL_DANRE (Adenosine deaminase-like protein OS=Danio rerio GN=adal PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.907e-32
Identity = 85/249 (34.14%), Postives = 135/249 (54.22%), Query Frame = 2
Query:   65 WFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLA---LEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK-EEIQSMLDFLPQRIGH 799
            ++  +PKVELHAHLNGS+   T+ +L +   +  + +   +  +     R+L E F++F +IH L      +  + + V+++FA++ + YLELR+TP+     G+SK+ Y++ V+E +R      VD                            I VR L+++DRR   E AM+TVKLA   L   D  VVG+DLSG+PT G     L AL+ A+  GL++ LH  E+P++ +E + +L+  P RIGH
Sbjct:    8 FYRQLPKVELHAHLNGSVSFETMEKLIK--RKPHLNIEHSMTAIRRGQRRTLDECFQVFKVIHQLVDSEEDILMVAKSVIQEFAADGVKYLELRSTPREVTETGLSKQRYIETVLEAIRQCKQEGVD----------------------------IDVRFLVAVDRRHGPEVAMQTVKLAEDFLLSSDGTVVGLDLSGDPTVGHGKDLLAALQKAKNCGLKLALHLSEVPSQIDETELLLNLPPDRIGH 226          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADD_CLOPS (Adenosine deaminase OS=Clostridium perfringens (strain SM101 / Type A) GN=add PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.427e-20
Identity = 69/246 (28.05%), Postives = 118/246 (47.97%), Query Frame = 2
Query:   74 SMPKVELHAHLNGSIRDSTLLELARVLGEK-GVIVFSDVEH--VIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL-PQRIGH 799
            ++PK+ELH HL+GS+R  T +ELA+  G K     +  V+   VI K   SL +    F L   L      + R+  E++ED + EN+ Y+E+R  P  +   GM+++  +++V++G+R         A    D++                       L+LS  R  + ++  E ++        GVV IDL+G   +G    +   +K ARE G ++T+H GE    + ++  ++ L  +RIGH
Sbjct:    5 NLPKIELHCHLDGSLRVETAIELAKKEGIKLHSYEYDKVKELLVISKECNSLEDYLNRFALPAKLLQRPENLERVAFELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIKGIRK--------AEEFYDIKG---------------------NLILSCLRHHSIDSVYEVIEEGKNFIGKGVVAIDLAGGELEGFVKPYKEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGH 221          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADD_CLOPE (Adenosine deaminase OS=Clostridium perfringens GN=add PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.699e-20
Identity = 69/246 (28.05%), Postives = 118/246 (47.97%), Query Frame = 2
Query:   74 SMPKVELHAHLNGSIRDSTLLELARVLGEK-GVIVFSDVEH--VIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL-PQRIGH 799
            ++PK+ELH HL+GS+R  T +ELA+  G K     +  V+   VI K   SL +    F L   L      + R+  E++ED + EN+ Y+E+R  P  +   GM+++  +++V++G+R         A    D++                       L+LS  R  + ++  E ++        GVV IDL+G   +G    +   +K ARE G ++T+H GE    + ++  ++ L  +RIGH
Sbjct:    5 NLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYLNRFALPVKLLQRAENLERVAFELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIKGIRK--------AEELYDIKG---------------------NLILSCLRHHSIDSVYEVIEEGKNFIGKGVVAIDLAGGELEGFVKPYEEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGH 221          
BLAST of CN182482 vs. ExPASy Swiss-Prot
Match: ADD_CLOP1 (Adenosine deaminase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=add PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18
Identity = 67/246 (27.24%), Postives = 117/246 (47.56%), Query Frame = 2
Query:   74 SMPKVELHAHLNGSIRDSTLLELARVLGEK-GVIVFSDVEH--VIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSTDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL-PQRIGH 799
            ++PK+ELH HL+GS+R  T +ELA+  G K     +  V+   VI K   SL +    F L   L      + R+  E++ED + EN+ Y+E+R  P  +   GM+++  +++V++G+R         A    D++                       L+LS  R  + ++  E ++        GVV IDL+G   +     +   +K AR+ G ++T+H GE    + ++  ++ L  +RIGH
Sbjct:    5 NLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYLNRFALPVKLLQRAENLERVAFELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIKGIRK--------AEELYDIKG---------------------NLILSCLRHHSIDSVYEVIEEGKNFIGKGVVAIDLAGGELENFVKPYEEVMKLARKAGFRVTIHAGETGYGKNVRDAIELLGAERIGH 221          
The following BLAST results are available for this feature:
BLAST of CN182482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ADAL_HUMAN7.143e-3937.94Adenosine deaminase-like protein OS=Homo sapiens G... [more]
ADAL_BOVIN2.714e-3837.55Adenosine deaminase-like protein OS=Bos taurus GN=... [more]
ADAL_MOUSE1.031e-3736.51Adenosine deaminase-like protein OS=Mus musculus G... [more]
ADAL_DROPS3.106e-3438.25Adenosine deaminase-like protein OS=Drosophila pse... [more]
ADALA_XENLA6.919e-3436.08Adenosine deaminase-like protein A OS=Xenopus laev... [more]
ADAL_DROME9.991e-3334.14Adenosine deaminase-like protein OS=Drosophila mel... [more]
ADAL_DANRE2.907e-3234.14Adenosine deaminase-like protein OS=Danio rerio GN... [more]
ADD_CLOPS7.427e-2028.05Adenosine deaminase OS=Clostridium perfringens (st... [more]
ADD_CLOPE9.699e-2028.05Adenosine deaminase OS=Clostridium perfringens GN=... [more]
ADD_CLOP11.829e-1827.24Adenosine deaminase OS=Clostridium perfringens (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002I13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182482 ID=CN182482; Name=CN182482; organism=Citrus sinensis; type=EST; length=809bp
GATCCATAAACAAACGTGTTGGGAAAAAGGAAAAAAAAATAAAATTCCAC
AAACGAAAATGGAGTGGTTTGCGTCGATGCCAAAGGTTGAATTACATGCC
CACCTGAATGGCTCCATTAGAGACTCTACTCTTCTGGAGCTTGCAAGAGT
TTTGGGTGAAAAGGGTGTCATTGTCTTCTCAGATGTGGAGCATGTTATTA
TGAAAAGTGACCGTTCTTTACATGAAGTGTTCAAGTTATTTGACCTGATC
CACGTTCTCACTACTGACCACGCAACCGTGACAAGAATTACTCAAGAAGT
GGTTGAAGATTTTGCTTCCGAGAATATTGTATATCTAGAACTAAGAACTA
CTCCAAAGAGAAATGAGTCTATTGGAATGAGCAAACGATCTTACATGGAT
GCAGTCGTGGAGGGTTTAAGGGCTGTCAGTGCAGTTGATGTTGATTTTGC
TTCTCGTAGCACAGATGTTAGACGTCCTGTGAATACTAAGAATATGAATG
ATGCATGTAATGGTACTAGAGGAAAAAAGATATATGTTAGACTTCTTCTC
AGCATTGACCGTCGGGAGACAACTGAAGCTGCCATGGAAACTGTTAAGCT
GGCTCTGGAAATGAGGGACCTAGGGGTAGTTGGCATTGACCTCTCTGGAA
ACCCTACCAAGGGTGAATGGACTACTTTCCTGCCAGCATTAAAATTTGCT
AGGGAACAAGGTCTTCAAATAACTCTTCACTGTGGGGAGATACCTAATAA
GGAGGAGATCCAAAGTATGCTAGACTTTCTTCCCCAGAGAATTGGGCATG
CTTGTTGCT
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