CN189070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.059e-48 Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FEVRSP+RVQIKFEEG++GTPQVTDSLV+PENVEFLGQKID SPFKGIL SVQDT S VAK I SQPPLKF I NSN QSW+LT YLDED ISRADAG VFVFIKEGSPLLMP Sbjct: 210 FEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 323
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 9.872e-44 Identity = 86/114 (75.44%), Postives = 99/114 (86.84%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FEVRSP+RVQIKFEEGI+GTPQ+TDS+V+PENVEFLGQKID SPFKG++ SVQDT S VAK+I SQPP+KF I N+N QSW+LT YLD++ ISR DAG VFV IKEGSPLL P Sbjct: 213 FEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLDDELRISRGDAGSVFVLIKEGSPLLKP 326
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.426e-42 Identity = 84/114 (73.68%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FEVRSP+RVQIKFEEGI+GTPQ+TDS+V+PENVEFLGQKID SPFKG++ SVQDT S V K+I SQPP+KF I N+N QSW+LT YLD++ I R DAG VFV IKEGSPLL P Sbjct: 213 FEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDDELRIPRGDAGSVFVLIKEGSPLLKP 326
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.631e-38 Identity = 77/114 (67.54%), Postives = 92/114 (80.70%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FE+RSP+RVQIKFEEG++GTPQ+TDS+ IPE VEFLGQKID +P +G+L SVQDT + VA+ I SQPPLKF + + QSW+LT YLD+D ISR D G VFV IKEGSPLL P Sbjct: 206 FEIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP 319
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.631e-38 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = -1 Query: 272 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLL 607 FEVRSP RV IKFEEG++GTPQ+TDS+VIP+NV+FLGQKIDF+PF GI+ S+QDT S VAK I SQPP+KF I N+ +SW+LT YLDED ISR D G VFV +KEGS L Sbjct: 209 FEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGGSVFVLLKEGSSFL 320
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.746e-38 Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FE+RSP+RVQIKFE+G++GTPQ+TDS+ IPE VE LGQKID +P +G+L SVQDT S VA+ I SQPPLKF + N QSW+LT YLD+D ISR D G VFV IKEGSPLL P Sbjct: 197 FEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP 310
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37 Identity = 75/114 (65.79%), Postives = 92/114 (80.70%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FE+RSP+RVQIKFE+G++GTPQ+TDS+ IPE+VE LGQKID +P KG+L SVQDT S VA+ I +QPPLKF + + N QSW+LT YLD+D ISR D G V+V IKEGS LL P Sbjct: 205 FEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIKEGSSLLNP 318
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.169e-36 Identity = 75/114 (65.79%), Postives = 90/114 (78.95%), Query Frame = -1 Query: 266 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLLMP 607 FEVRSP+RVQ+KFE+G++GTPQ+TDS+ IPE VE LGQKID +P KG+L SVQDT S VA+ I SQPPLKF + + QSW+LT YLD+D ISR D G VFV I+EGS LL P Sbjct: 214 FEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGGSVFVLIREGSSLLNP 327
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.132e-31 Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = -1 Query: 272 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLL 607 FEVRSP+RVQIKF+EGI+GTPQ+TDS+V+PE E GQ ID +P KGI S+++ S VA+ I QPPLK I N +SW+LT YLD++ ISR D +FV KEGS LL Sbjct: 207 FEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDDELRISRGDGSSIFVLFKEGSTLL 318
BLAST of CN189070 vs. ExPASy Swiss-Prot
Match: PAP3_BRACM (Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris GN=PAP3 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.174e-20 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 272 FEVRSPQRVQIKFEEGILGTPQVTDSLVIPENVEFLGQKIDFSPFKGILFSVQDTGSFVAKAIFSQPPLKFFIFNSNGQSWVLTPYLDEDFWISRADAGRVFVFIKEGSPLL 607 FEVR+P R+++ F+EG L P++ S+ +PE+V GQ+I+ S K L +QD + +++AI QPPLK + G SW+LT YLD+D ISR D G +FV +EGS LL Sbjct: 248 FEVRTPSRIEVSFKEGTLKPPEIKSSVDLPESVGVFGQEINLSFLKQSLNPLQDVAANISRAISGQPPLKLPFPGNRGSSWLLTTYLDKDLRISRGDGG-LFVLAREGSSLL 358 The following BLAST results are available for this feature:
BLAST of CN189070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189070 ID=CN189070; Name=CN189070; organism=Citrus sinensis; type=EST; length=607bpback to top |