CN189065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189065 vs. ExPASy Swiss-Prot
Match: RSP41_ARATH (Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14 Identity = 63/174 (36.21%), Postives = 79/174 (45.40%), Query Frame = -1 Query: 321 SPDSGRNSSRSPYKKERAAIGHVRGPSRSPYRRDRGSPENGHGS-SPSPYRKGKPSPN-------------------------NGRGPSRSP--------------YE--RERPSPENXXXXXXXXXXXXXXXPDNGRVPSPNSMPEPRDSPGYDGADSPINERYRSRSPPAED 716 SPD R S SPY++ER + + RG S ++R+R SP+ G G SPSPY++ + SP+ GRG SRSP YE RE SP P+NG+V SP + E GYDGADSPI E SRSPPAE+ Sbjct: 185 SPDRRRRSP-SPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRARLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRES-PSRSPPAEE 356
BLAST of CN189065 vs. ExPASy Swiss-Prot
Match: RSP40_ARATH (Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13 Identity = 54/161 (33.54%), Postives = 75/161 (46.58%), Query Frame = -1 Query: 321 RNSSRSPYKKERAAIGHVRGPSR-SPYRRDRGSPENGHGSSPSPYRK---GKP--------------------------SPNNGR---GPSRSPYERERP-SPENXXXXXXXXXXXXXXXPDNGRVPSPNSMPEPRDSPGYDGADSPINERYRSRSPPAED 701 R S SPYK+ER + + RG S + YR++R SP+ G SPSPY+K G P SPNN R P+ SP+++E P + P+NG+V SP S+ GYDGA+SP+ + RSPPA++ Sbjct: 190 RRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 350 The following BLAST results are available for this feature:
BLAST of CN189065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189065 ID=CN189065; Name=CN189065; organism=Citrus sinensis; type=EST; length=719bpback to top |