CX675973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A5_ARATH (Probable histone H2A.5 OS=Arabidopsis thaliana GN=At5g27670 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.366e-37 Identity = 80/120 (66.67%), Postives = 88/120 (73.33%), Query Frame = -2 Query: 195 TKPTXXXXXXXXXXXXXKISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 554 TKPT +SKSVKAGLQFPVGRIAR+LKKGRYA R GSGAP+Y+ AGNAARDNKKNRINPRH+ LA+RND+ELG+LL GVTIASGGVLPNINPVLL Sbjct: 8 TKPTRGAGGRKGGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLL 127
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.742e-37 Identity = 81/123 (65.85%), Postives = 90/123 (73.17%), Query Frame = -2 Query: 195 MEVTKPTXXXXXXXXXXXXXKISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 563 M+ TK T ++KS+KAGLQFPVGRI R+LKKGRYAQR+GSGAPIY+ AGNAARDNKK+RI PRHVLLAVRND+ELGKLL GVTIASGGVLPNINPVLL Sbjct: 1 MDATKTTKGAGGRKGGPRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLL 123
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.671e-36 Identity = 78/102 (76.47%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +S+SVKAGLQFPVGRI RFLKKGRYAQR+GSGAP+Y+ AGNAARDNKKNRI PRHVLLAVRND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 24 VSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLL 125
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.083e-35 Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +S+SVKAGLQFPVGRI R+LKKGRYAQR+G+GAP+Y+ AGNAARDNKKNRI PRHVLLA+RND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 127
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.083e-35 Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +S+SVKAGLQFPVGRI R+LKKGRYAQR+G+GAP+Y+ AGNAARDNKKNRI PRHVLLA+RND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 127
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.083e-35 Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +S+SVKAGLQFPVGRI R+LKKGRYAQR+G+GAP+Y+ AGNAARDNKKNRI PRHVLLA+RND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 29 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 130
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.083e-35 Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +S+SVKAGLQFPVGRI R+LKKGRYAQR+G+GAP+Y+ AGNAARDNKKNRI PRHVLLA+RND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 29 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 130
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.412e-35 Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +++SV+AGLQFPVGR+ RFLKKGRYAQR+G+GAP+Y+ AGNAARDNKKNRI+PRH+LLAVRND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 24 VTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLL 125
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.374e-35 Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +++S++AGLQFPVGRI R+LKKGRYAQR+G+GAP+Y+ AGNAARDNKKNRI PRHVLLAVRND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 24 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLL 125
BLAST of CX675973 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSJ (Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.019e-35 Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = -2 Query: 195 ISKSVKAGLQFPVGRIARFLKKGRYAQRMGSGAPIYMXXXXXXXXXXXXXXAGNAARDNKKNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLL 500 +S+SVKAGLQFPVGRI R+LK+GRY+QR+G+GAP+Y+ AGNAARDNKKNRI PRHVLLA+RND+ELGKLL GVTIA GGVLPNINPVLL Sbjct: 27 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 128 The following BLAST results are available for this feature:
BLAST of CX675973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675973 ID=CX675973; Name=CX675973; organism=Citrus sinensis; type=EST; length=639bpback to top |