CN182415

Overview
NameCN182415
Unique NameCN182415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1430 contig Csv1_Contig1430:350..1110. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.815e-34
Identity = 66/151 (43.71%), Postives = 100/151 (66.23%), Query Frame = -3
Query:  307 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 759
            +ALD++RG+ YLHS+ ++HRD+K+ N+LL+    +K+ADFG + +E Q  R+  G  GT  +MAPE++  KPY RK DVYSFGI LWE+    +P+  ++    + AV  +N RP +P  C  +LA ++++CW  NP KRP    +V +LE
Sbjct:  192 LALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQC-REAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSNIVAVLE 341          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: SHKA_DICDI (Dual specificity protein kinase shkA OS=Dictyostelium discoideum GN=shkA PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31
Identity = 66/159 (41.51%), Postives = 101/159 (63.52%), Query Frame = -3
Query:  301 IALDLARGLSYLHSKK--IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL-SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 759
            +A D A G+ +LHS     +HRD+KT N+L+DAN T+K+ DFG+++++ +      G+ G  G   +MAPEVL G+ +N K DVYSFG+ LW+I+     +P+  +F    +A+  + LRP IP  CP SL  +++KCWD NP+ RP  + +V  LE +
Sbjct:  145 MAKDAALGVLWLHSSNPVFIHRDLKTSNLLVDANLTVKVCDFGLSQIKQRGENLKDGQDGAKGTPLWMAPEVLQGRLFNEKADVYSFGLVLWQIFTRQELFPEFDNFFKFVAAICEKQLRPSIPDDCPKSLKELIQKCWDPNPEVRPSFEGIVSELEEI 303          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.107e-30
Identity = 64/152 (42.11%), Postives = 99/152 (65.13%), Query Frame = -3
Query:  310 IALDLARGLSYLHS--KKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 759
            I +++A+G+SYLHS    I+HRD+K  N+L+D N  +KIADFG AR++ +N   +    GT  + APE++    Y+ K DV+SFGI +WE+  C  P+   +F  ++  ++ +++RP IP+ CP   A +MRKCW A   KRP MD+V+ +L
Sbjct: 1500 ILVNIAKGISYLHSFDPPIIHRDIKPSNILIDENWNVKIADFGFARIKEENA--IMTRCGTPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLTCKEPFIGANFMKITMDIL-EDVRPKIPQDCPEEFAKLMRKCWHAKSTKRPTMDDVIIVL 1648          

HSP 2 Score: 95.9005 bits (237), Expect = 2.558e-19
Identity = 58/168 (34.52%), Postives = 91/168 (54.17%), Query Frame = -3
Query:  286 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR----VEAQNPRDMTGETGTLGYMAPEVL--DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLA----SIMRKCWDANPDKRPVMDEVVKLLEAVNTNKG 759
            IA   ++G+ +LHS  I HRD+K+ N+LLD    +K++DFG+ +    V++ NP       GT+ + APE+L  D +      DVYSFGI +WE+   D PY  +S   ++ +V+R N RP I     S +A     ++  CW  +P  RP   E++  L  +  + G
Sbjct:  889 IAYQASKGMHFLHSSGITHRDLKSLNLLLDIKWNVKVSDFGLTKFKSDVKSINPEKF---AGTIQWTAPEILSEDREVDYILSDVYSFGIIMWELITRDQPYFGMSPAAIAVSVIRDNYRPVISDQLRSEVAPEYIELLTSCWHFDPTIRPTFLEIMTRLSNLMGDSG 1053          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.494e-30
Identity = 59/153 (38.56%), Postives = 102/153 (66.67%), Query Frame = -3
Query:  301 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 759
            +A+ +A+G++YLH   ++HRD+K+ N+LLD +  +KI DFG++++++++  +MT   G+  +M+PE+L G+ Y  K DVY+FGI LWE+   ++PY  L    ++ AV  ++LRP IP   P  L+ +++ CW  +P KRP   E++ LL  +
Sbjct:  764 LAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKST-EMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLLNEI 915          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.933e-29
Identity = 60/144 (41.67%), Postives = 90/144 (62.50%), Query Frame = -3
Query:  319 ARGLSYLHSKK--IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 744
            A G+ YLH+    I+HRD+K  N+L+D +  +KIADFG AR++ +N   +    GT  + APE++ G+ Y  K DV+SFGI +WE+  C  P+   +F  VS  ++ +  RP IP  CP     +M++CW A PDKRP M++V+
Sbjct: 1498 ALGIGYLHNSDPIIIHRDIKPSNILVDDSMNVKIADFGFARIKEEN--SVMTRCGTPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLTCKEPFSGCNFMKVSMDIL-EGARPQIPSDCPIDFTKLMKQCWHAKPDKRPSMEDVI 1638          

HSP 2 Score: 94.3597 bits (233), Expect = 7.443e-19
Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -3
Query:  265 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP-RDMTGETG--TLGYMAPEVLDGKP--YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIP----RCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTNKGGGMIPEG 759
            IA   A+G+ +LHS  IVHRD+K+ N+LLD+   +K++DFG+ +++  N  +  T E    ++ + APEVL  K        DVYSFGI +WE+     PY  LS   ++ AV+R NLRP+I         S    ++  CW  +   RP     ++++  ++T  GG  I  G
Sbjct:  895 IAYQAAKGMHFLHSSDIVHRDLKSLNLLLDSKWNVKVSDFGLTKIKDNNKGKSSTKEDSVCSIQWTAPEVLSEKQDIDYILADVYSFGIIMWELMTRLRPYIGLSPAAIAVAVIRDNLRPEIQEEDINLMSSDYVELVNICWHKDTMIRP---SFLEIMTKLSTLIGGSGITTG 1065          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.015e-28
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = -3
Query:  292 ALDLARGLSYLHSK---KIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTN 756
            A D+A+G+ YLH +   K++HRD+K+ N+++ A+  LKI DFG +R    N        GT  +MAPEV+   P +  CD YS+G+ LWE+   ++P+  L    V+  VV +N R  IP  CP S A ++ +CW+A+  KRP   +++ +LE+++ +
Sbjct:  111 ATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFH--NHTTHMSLVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMSND 266          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.015e-28
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = -3
Query:  292 ALDLARGLSYLHSK---KIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTN 756
            A D+A+G+ YLH +   K++HRD+K+ N+++ A+  LKI DFG +R    N        GT  +MAPEV+   P +  CD YS+G+ LWE+   ++P+  L    V+  VV +N R  IP  CP S A ++ +CW+A+  KRP   +++ +LE+++ +
Sbjct:  111 ATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFH--NHTTHMSLVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMSND 266          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: SHKE_DICDI (Dual specificity protein kinase shkE OS=Dictyostelium discoideum GN=shkE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.954e-27
Identity = 64/160 (40.00%), Postives = 98/160 (61.25%), Query Frame = -3
Query:  292 IALDLARGLSYLHSK-KIVHRDVKTENMLLDANRTLKIADFGVARV--EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD-VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTN 759
            + LD A G+++LH    I+HRD+K  N+++  ++T+KI DFG ++V        D  G  GT  YMAPEV+    +N K DVYSFG+ L+E+  C+  +P+ S  D    A+  + LRP IP   P SL ++++KCWD +P+KRP  +EV + +  V T+
Sbjct:  338 MCLDAALGINWLHGICNIIHRDLKLANLMISKDKTVKIGDFGFSQVIKTGTTLSDQKGPKGTALYMAPEVMMKHEFNEKADVYSFGLILYEMATCEELFPEYSEIDPFYDAICNKKLRPPIPDSFPKSLKTLIQKCWDHDPNKRPSFNEVTQRMNEVLTD 497          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: Y1197_DICDI (Probable serine/threonine-protein kinase DDB_G0288147 OS=Dictyostelium discoideum GN=DDB_G0288147 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.698e-27
Identity = 61/156 (39.10%), Postives = 99/156 (63.46%), Query Frame = -3
Query:  295 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNT 759
            +A+D A+ L ++HSK I+HRDVK  N L++ N  +K+ DFGV+R VEA+    + G   T  YMA E+ +G+PY++  DV+SFG+ LWE++  D PY +L+  +  +  V+   RP IP   P+++A+++  CW   P  RP   E++K+  ++ T
Sbjct:  704 MAIDAAQSLEFIHSKNIIHRDVKGNNFLVNENWEVKLIDFGVSRFVEARLGYTIVG---TPNYMACELFNGQPYHQPADVFSFGVVLWEMFTQDTPYKNLTRIE-QALFVQSGGRPTIPPTVPTTIANLIESCWVQTPHLRPTFTEILKVFYSLLT 855          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26
Identity = 58/150 (38.67%), Postives = 93/150 (62.00%), Query Frame = -3
Query:  310 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 759
            IA D+ARG+ +LH++ I+HRD+K+ N+L+D +  +KIAD G+AR E    + MT   GT+ + APE+L  + YN+K DVYS+ I L+E+   + PY  +   +    V  + LRP++P  C  +   ++  CW  +P+KRP  +E+   L
Sbjct: 1180 IAFDIARGMQHLHTRNIIHRDLKSSNLLMDKHFNIKIADLGIAR-ETSFTQTMT-TIGTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPYQGIPPMNAGILVASKGLRPELPDNCDPNWKKLVVWCWSEDPNKRPSFEEITNYL 1327          
The following BLAST results are available for this feature:
BLAST of CN182415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH2.815e-3443.71Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
SHKA_DICDI2.913e-3141.51Dual specificity protein kinase shkA OS=Dictyostel... [more]
YR826_MIMIV1.107e-3042.11Putative serine/threonine-protein kinase/receptor ... [more]
Y9955_DICDI5.494e-3038.56Probable serine/threonine-protein kinase DDB_G0267... [more]
YR818_MIMIV7.933e-2941.67Putative serine/threonine-protein kinase/receptor ... [more]
MLTK_MOUSE3.015e-2837.34Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN3.015e-2837.34Mitogen-activated protein kinase kinase kinase MLT... [more]
SHKE_DICDI1.954e-2740.00Dual specificity protein kinase shkE OS=Dictyostel... [more]
Y1197_DICDI9.698e-2739.10Probable serine/threonine-protein kinase DDB_G0288... [more]
Y9963_DICDI1.267e-2638.67Probable serine/threonine-protein kinase DDB_G0272... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002G17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182415 ID=CN182415; Name=CN182415; organism=Citrus sinensis; type=EST; length=761bp
GAGGGTTTGGAATTGAATAAAACTTCAGACCACGAAAATAATTGCACAAA
TCGAAAGCGTAGCTTCAATACATTTGAAAACACGGTGGACATCAAATAGG
ACTGCAGAAACGTATGAACTCAGTATCAATAAACACAGCTGCAGGCGCGG
TAATAATTAATAAACTGCTCTGATTCTTTCATCCGCACAGATGAGTGGTA
AAATGGAAAATAAAAAGAATCAAGGGCCCCGAGTTGGGATGAAACATAGA
CAGCCATGTGCTTGACCTTCAGGTATCATTCCACCCCCCTTGTTTGTATT
CACTGCTTCCAGGAGCTTCACTACCTCGTCCATAACAGGGCGTTTATCCG
GGTTTGCATCCCAACATTTTCTCATGATGCTTGCCAGTGAACTTGGGCAA
CATCTTGGGATATCTGGTCGTAAATTCTGTCGAACAACTGCAGATGAAAC
ATCTGTGAAACTAAGATCGGGATAAGGCATATCGCAGCAGTAGATTTCCC
ATAGGCATATCCCAAAGCTATAGACATCGCATTTCCTATTGTAAGGCTTC
CCATCCAGTACCTCTGGGGCCATGTACCCAAGAGTTCCTGTTTCCCCAGT
CATGTCCCTTGGATTCTGAGCTTCAACTCGAGCAACACCAAAATCAGCAA
TTTTCAAAGTTCTGTTAGCATCTAGCAACATGTTTTCTGTCTTAACATCA
CGATGTACAATCTTTTTTGAGTGAAGATAGCTCAATCCTCTAGCAAGATC
CAAAGCAATTT
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