CN182405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB2_GOSHI (V-type proton ATPase subunit B 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 4.544e-73 Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTRRDH+DVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFV QGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KTLDQYYSRDAAN Sbjct: 246 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAAN 386
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB2_ARATH (V-type proton ATPase subunit B2 OS=Arabidopsis thaliana GN=VHA-B2 PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.727e-72 Identity = 135/141 (95.74%), Postives = 137/141 (97.16%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KTLDQ+YSRD N Sbjct: 347 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDTTN 487
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB2_HORVU (V-type proton ATPase subunit B 2 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.255e-72 Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KTLDQ+YSRDA + Sbjct: 343 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDATH 483
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB1_HORVU (V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 3.846e-72 Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KTLD +YSRDAA+ Sbjct: 348 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 488
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB3_ARATH (V-type proton ATPase subunit B3 OS=Arabidopsis thaliana GN=VHA-B3 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 4.253e-71 Identity = 132/141 (93.62%), Postives = 137/141 (97.16%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTR+DHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFV QGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KTLDQ+YSRD+ + Sbjct: 347 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDSTS 487
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB1_ARATH (V-type proton ATPase subunit B1 OS=Arabidopsis thaliana GN=VHA-B1 PE=2 SV=2) HSP 1 Score: 267.314 bits (682), Expect = 4.253e-71 Identity = 132/141 (93.62%), Postives = 137/141 (97.16%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTR+DHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFV QGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KTLDQ+YSRD+ + Sbjct: 346 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDSTS 486
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB1_GOSHI (V-type proton ATPase subunit B 1 OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 5.554e-71 Identity = 133/141 (94.33%), Postives = 135/141 (95.74%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 428 GYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTRRDH+DVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERK V QGAYD+RNIFQSLDLAWTLLRIFPRELLHRIP KT DQYYSRDA N Sbjct: 348 GYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKVVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTHDQYYSRDAGN 488
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB1_ACEAT (V-type proton ATPase subunit B 1 OS=Acetabularia acetabulum PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 4.713e-62 Identity = 117/137 (85.40%), Postives = 126/137 (91.97%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSR 416 GYITEGQIY+DRQL NRQIYPPINVLPSLSRLMKSAIGEGMTR+DHS+VSNQLYANYAIGKDV AMKAVVGEEALSSEDLLYLEFLDKFERKFV QG Y++R IF SLDLAWTLLR+FP+ELL RI KTL++ Y R Sbjct: 353 GYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSEVSNQLYANYAIGKDVAAMKAVVGEEALSSEDLLYLEFLDKFERKFVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB2_PONAB (V-type proton ATPase subunit B, brain isoform OS=Pongo abelii GN=ATP6V1B2 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.980e-60 Identity = 110/140 (78.57%), Postives = 127/140 (90.71%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAA 425 GYITEGQIY+DRQL NRQIYPPINVLPSLSRLMKSAIGEGMTR+DH+DVSNQLYA YAIGKDVQAMKAVVGEEAL+S+DLLYLEFL KFER F+AQG Y++R +F++LD+ W LLRIFP+E+L RIP TL ++Y RD+A Sbjct: 370 GYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509
BLAST of CN182405 vs. ExPASy Swiss-Prot
Match: VATB2_HUMAN (V-type proton ATPase subunit B, brain isoform OS=Homo sapiens GN=ATP6V1B2 PE=1 SV=3) HSP 1 Score: 231.876 bits (590), Expect = 1.980e-60 Identity = 110/140 (78.57%), Postives = 127/140 (90.71%), Query Frame = 3 Query: 6 GYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAA 425 GYITEGQIY+DRQL NRQIYPPINVLPSLSRLMKSAIGEGMTR+DH+DVSNQLYA YAIGKDVQAMKAVVGEEAL+S+DLLYLEFL KFER F+AQG Y++R +F++LD+ W LLRIFP+E+L RIP TL ++Y RD+A Sbjct: 370 GYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509 The following BLAST results are available for this feature:
BLAST of CN182405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182405 ID=CN182405; Name=CN182405; organism=Citrus sinensis; type=EST; length=608bpback to top |