EY666139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.912e-38 Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RKW K LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 358 RKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 HSP 2 Score: 67.781 bits (164), Expect = 3.912e-38 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 287 GGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 397 GG+AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 4.228e-37 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RKW K LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN+DAI G F+G Sbjct: 356 RKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 HSP 2 Score: 67.0106 bits (162), Expect = 4.228e-37 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 290 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 403 GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.586e-36 Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RKW K LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN DA+++G+FYG Sbjct: 349 RKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 HSP 2 Score: 66.2402 bits (160), Expect = 1.586e-36 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 290 GKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 400 G+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.066e-36 Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RK+ K LVNS+E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+AN DAI G FYG Sbjct: 358 RKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437 HSP 2 Score: 71.633 bits (174), Expect = 2.066e-36 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 2 Query: 290 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 397 GK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.568e-36 Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RKW K LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN+DA+++G+FYG Sbjct: 348 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 HSP 2 Score: 65.0846 bits (157), Expect = 4.568e-36 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 290 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 400 GK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.384e-27 Identity = 58/80 (72.50%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RKW K LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN DA+ +G FYG Sbjct: 358 RKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.697e-25 Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 252 RKW K LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN+DA+++G FYG Sbjct: 345 RKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.522e-25 Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 249 RKW K LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG ANEDAI+SG+F+ Sbjct: 360 RKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.748e-24 Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNF 246 RKW K LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN+DAI+ G F Sbjct: 358 RKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of EY666139 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 5.086e-24 Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 13 RKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 249 R+W + LVNSKE PTFEQP++T+EKLLEYG+M+V EQENVKRVQLADKYL+EAALGEANEDA+++G+F+ Sbjct: 354 RRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432 The following BLAST results are available for this feature:
BLAST of EY666139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666139 ID=EY666139; Name=EY666139; organism=Citrus sinensis; type=EST; length=535bpback to top |