CN182337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182337 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.706e-50 Identity = 101/179 (56.42%), Postives = 122/179 (68.16%), Query Frame = -1 Query: 236 IADYPAKCTQPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSAKKCEGGALGWSNAQDPGQDDSPSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKGALRDLGKKMEDQPLTPAEQGEG--------EVNDSDCGTAAHTDNELVSFSNDDDSALISEH 748 + +Y ++C+ PQRA SLDRFR+KR RCF+KKVRY VRQEVALRM RNKGQFTS+K +G A QD QDD+ E SCTHCGISSK TPMMRRGPSGPR+LCNACGLFWAN+G LRDL KK E+ L + +G +N HT +VS +N D+S L+ +H Sbjct: 134 VVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDG-AYNSGTDQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDGGSVADAANNLNTEAASVEEHT--SMVSLANGDNSNLLGDH 309
BLAST of CN182337 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.164e-37 Identity = 81/140 (57.86%), Postives = 95/140 (67.86%), Query Frame = -1 Query: 377 PHSQRGIADYPA---KCTQPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSAK----KCEGGALGWSNAQDPGQDDSPS---ETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKGALRDLGK 766 PH ++ P + + PQR ASL RFR+KRK R FDKK+RY+VR+EVALRMQRNKGQFTSAK + W + Q + S + E SC HCGI KSTPMMRRGP+GPR+LCNACGL WANKGA RDL K Sbjct: 126 PHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSK 265
BLAST of CN182337 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 8.222e-37 Identity = 81/140 (57.86%), Postives = 94/140 (67.14%), Query Frame = -1 Query: 377 PHSQR---GIADYPAKCTQPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSAKKC--EGGALG--WSNAQD---PGQDDSPSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANKGALRDLGK 766 PH G++ P + + PQR ASL RFR+KRK R FDK +RY+VR+EVALRMQR KGQFTSAK + G+ G W + Q G + E C HCG S KSTPMMRRGP GPR+LCNACGL WANKG LRDL K Sbjct: 122 PHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSK 261 The following BLAST results are available for this feature:
BLAST of CN182337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182337 ID=CN182337; Name=CN182337; organism=Citrus sinensis; type=EST; length=781bpback to top |