CN182333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP14_ARATH (Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana GN=UBP14 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 88/126 (69.84%), Postives = 103/126 (81.75%), Query Frame = -2 Query: 193 KNSVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVGASVDPPKEMGYLYFFERLN 570 ++SV+TLLSFGF+E+VAR ALKASGGDIEKATDW+FNNP QTPA +GLPDGGGKY+LFGIVSH+GTS CGHYVAHILK+GRW IFND+KVG S DPPK+MGY+YFF+RL+ Sbjct: 673 QSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNPNASVSDMDVSSSNSA-QTPAQSGLPDGGGKYKLFGIVSHMGTSVHCGHYVAHILKEGRWVIFNDDKVGISTDPPKDMGYVYFFQRLD 797
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP5_PONAB (Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii GN=UBP5 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.370e-26 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 190 KNSVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN-------PXXXXXXXXXXXXXXXAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVGASVDPPKEMGYLYFFERLNS 570 ++ V T++S GFS + A AL+A+ +E+A DWIF++ P + DG GKY+LF +SH+GTST CGHYV HI K+GRW I+ND KV AS PPK++GY+YF++R+ S Sbjct: 725 EDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVAS 858
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP5_HUMAN (Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens GN=USP5 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.370e-26 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 190 KNSVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN-------PXXXXXXXXXXXXXXXAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVGASVDPPKEMGYLYFFERLNS 570 ++ V T++S GFS + A AL+A+ +E+A DWIF++ P + DG GKY+LF +SH+GTST CGHYV HI K+GRW I+ND KV AS PPK++GY+YF++R+ S Sbjct: 725 EDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVAS 858
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP5_MOUSE (Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus GN=Usp5 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 190 KNSVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN-------PXXXXXXXXXXXXXXXAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVGASVDPPKEMGYLYFFERLNS 570 ++ V T++S GFS + A AL+A+ +E+A DWIF++ P + DG GKY+LF +SH+GTST CGHYV HI K+GRW I+ND KV AS PPK++GY+YF++R+ S Sbjct: 725 EDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAESISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVVS 858
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP13_HUMAN (Ubiquitin carboxyl-terminal hydrolase 13 OS=Homo sapiens GN=USP13 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.086e-23 Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = -2 Query: 190 VETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXAQT-------PADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVGASVDPPKEMGYLYFFERLNS 561 V + S GF A AL+A+ ++E+A DWIF++P A P + DG G Y LF +SH+GTST GHY+ HI K+GRW I+ND+KV AS PPK++GY+YF+ R+ S Sbjct: 733 VAIITSMGFQRNQAIQALRATNNNLERALDWIFSHPEFEEDSDFVIEMENNANANIISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYICHIKKEGRWVIYNDHKVCASERPPKDLGYMYFYRRIPS 863
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBPA_DICDI (Ubiquitin carboxyl-terminal hydrolase A OS=Dictyostelium discoideum GN=ubpA PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 199 LWYYLKNSVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN--------PXXXXXXXXXXXXXXXAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVGASVDPPKEMGYLYFFER 585 L+ + V+ ++ GF++ A+ ALK + G++E+A DW+F++ T + + DG GKY L G +SH+G + CGHYV HI K+ RW FND V S PPKE+GY+YF++R Sbjct: 698 LFVFNSQDVDNIIGMGFTDSQAKLALKNTKGNLERAADWLFSHIDNLDELVAKDNASTSSINPSLIPQSTTSLQPVSDGVGKYELLGFISHLGNNVTCGHYVCHIKKNNRWIKFNDRHVQLSEQPPKELGYIYFYKR 834
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP14_SCHPO (Ubiquitin carboxyl-terminal hydrolase 14 OS=Schizosaccharomyces pombe GN=ubp14 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = -2 Query: 193 KNSVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXAQTPADAGLPDGGG--KYRLFGIVSHIGTSTQCGHYVAHILK--DGR--WAIFNDNKV--GASVDPPKEMGYLYFFERLN 570 + +V++L FGF+ AR L S +IE+A DWI N+P + Y L I+SH G+S GHYVA I K DG+ W +FND KV AS++ K GY+Y FERL+ Sbjct: 642 EENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILNHPDESFEEPPLEGSDSSIKNENMGSWESTNVPVNYNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAKTTGYVYLFERLD 775
BLAST of CN182333 vs. ExPASy Swiss-Prot
Match: UBP14_YEAST (Ubiquitin carboxyl-terminal hydrolase 14 OS=Saccharomyces cerevisiae GN=UBP14 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.626e-11 Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = -2 Query: 199 SVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILK----DGRWAIFNDNKVGA--SVDPPKEMGYLYFFER 564 S+ ++LS G + + R AL + GD+ ++ +W+FNN Q D G Y L ++ H G S GHYV I K +W ++ND K+ A S++ K+ GY+YF+ R Sbjct: 654 SLTSMLSMGLNPNLCRKALILNNGDVNRSVEWVFNNMDDDGTFPEPEVPNEEQQQKKDLGY-STAKPYALTAVICHKGNSVHSGHYVVFIRKLVADKWKWVLYNDEKLVAADSIEDMKKNGYIYFYTR 780 The following BLAST results are available for this feature:
BLAST of CN182333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182333 ID=CN182333; Name=CN182333; organism=Citrus sinensis; type=EST; length=799bpback to top |