CN182319

Overview
NameCN182319
Unique NameCN182319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:57..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 2.905e-63
Identity = 120/179 (67.04%), Postives = 141/179 (78.77%), Query Frame = 1
Query:   40 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S S AQL+P+FY +TCP+V   + D +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK AAPN NSARGF VID MKAAVE ACPR VSCADILTIAA+++V L+GGPSW VPLGRRDS  A  ALAN NLP PF TL +LK+SF+NVGL+   DLVALSG HTFG+
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGK 203          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 6.472e-63
Identity = 120/179 (67.04%), Postives = 138/179 (77.09%), Query Frame = 1
Query:   40 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S S AQL+P+FY ++CPNV N + D +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK SFRNVGLN   DLVALSG HTFG+
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGK 204          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.459e-62
Identity = 119/179 (66.48%), Postives = 139/179 (77.65%), Query Frame = 1
Query:   40 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S S AQL+P+FY  +CPNV N + + +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK+SFRNVGL+   DLVALSG HTFG+
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGK 204          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.221e-61
Identity = 116/177 (65.54%), Postives = 138/177 (77.97%), Query Frame = 1
Query:   46 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S AQL+P+FY ++CP V N + D +     SD RI  S++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK++F+NVGL+   DLVALSGAHTFG+
Sbjct:   29 SDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGK 205          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.594e-61
Identity = 116/177 (65.54%), Postives = 138/177 (77.97%), Query Frame = 1
Query:   46 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S AQL+P+FY ++CPNV N + D++     SD  I AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF V+D +KAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDSR A   LAN NLP P  TL ELK++F NVGLN   DLVALSG HTFG+
Sbjct:    7 SNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGK 183          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.302e-60
Identity = 116/181 (64.09%), Postives = 135/181 (74.59%), Query Frame = 1
Query:   34 EGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            + S S AQL P FY  TCP + N I D +     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NS RGF+VID MKAA+ERACPR VSCADI+TIA++ SV LSGGP W VPLGRRDS  A  ALAN  LP PF TL +LK++F +VGLN   DLVALSG HTFG+
Sbjct:   23 QASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGK 203          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.128e-60
Identity = 117/174 (67.24%), Postives = 134/174 (77.01%), Query Frame = 1
Query:   55 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            QL P FYS TCP+V N I++V+     +D RI AS++RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF VID MK A+ERACPR VSCADILTIA++ SV LSGGPSWAVPLGRRDS  A   LAN  LP PF TL +LK +F +VGLN   DLVALSG HTFGR
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGR 174          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60
Identity = 113/179 (63.13%), Postives = 134/179 (74.86%), Query Frame = 1
Query:   40 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S S AQLSPSFY  TCP V + + + +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAA+E+ACPR VSCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGP  TL +LK  F+NVGL+   DLVALSG HTFG+
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGK 196          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60
Identity = 115/179 (64.25%), Postives = 133/179 (74.30%), Query Frame = 1
Query:   40 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S S AQLSPSFY  TCP V +   + +K A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N  SARGF+VID MKAAVE+ACP+ VSCAD+L IAA++SV L+GGPSW VP GRRDS      LAN NLPGP  TL  LK  FRNVGL+   DLVALSG HTFG+
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGK 198          
BLAST of CN182319 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60
Identity = 114/179 (63.69%), Postives = 137/179 (76.54%), Query Frame = 1
Query:   40 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 576
            S S AQL+P+FY ++CPNV N + D++     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF  +D +KAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK +F  VGL+   DLVALSG HTFG+
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGK 202          
The following BLAST results are available for this feature:
BLAST of CN182319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER32_ARATH2.905e-6367.04Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER1A_ARMRU6.472e-6367.04Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER34_ARATH2.459e-6266.48Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH1.221e-6165.54Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1C_ARMRU1.594e-6165.54Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER23_ARATH2.302e-6064.09Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PERE5_ARMRU5.128e-6067.24Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER38_ARATH6.697e-6063.13Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_ARMRU6.697e-6064.25Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1B_ARMRU6.697e-6063.69Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182319 ID=CN182319; Name=CN182319; organism=Citrus sinensis; type=EST; length=578bp
CTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCA
AGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGA
ACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATC
GGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTG
TGATGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAAT
TTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAAC
ATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGA
TATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGT
CATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCT
CTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAA
ATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCAC
TCTCCGGAGCACACACGTTCGGAAGGGC
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