CN188976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.905e-54 Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 197 LIQRGIWDKHSSSEHCAFHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 L +G ++ F+ G+ CGACF+I+C ND +WC PGSI VTAT+FC GGWCNPPQQHFDLSQP ++IAQY+AGIVPV+YRRVPC R GGIRFTINGHSYFNLVLITNV GAGDV + +KG Sbjct: 53 LYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKG 189 HSP 2 Score: 41.9726 bits (97), Expect = 2.905e-54 Identity = 18/36 (50.00%), Postives = 20/36 (55.56%), Query Frame = 3 Query: 111 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 G GW +AHATFY YGNLYS+GYG Sbjct: 24 GGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYG 59
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.094e-53 Identity = 84/137 (61.31%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 197 LIQRGIWDKHSSSEHCAFHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 L +G ++ F+ G+ CG+CF+I+C ND +WC PGSI VTAT+FC GGWCNPP +HFDL+QP ++IAQY+AGIVPVSYRRVPC R GGIRFTINGHSYFNLVLITNV GAGDV + +IKG Sbjct: 52 LYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKG 188 HSP 2 Score: 44.2838 bits (103), Expect = 1.094e-53 Identity = 19/37 (51.35%), Postives = 21/37 (56.76%), Query Frame = 3 Query: 108 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 YG GW +AHATFY YGNLYS+GYG Sbjct: 22 YGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYG 58
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 3.158e-53 Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 197 LIQRGIWDKHSSSEHCAFHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 L +G ++ F+ G+ CGACF+IKC +D WC PG+I VTAT+FC GGWCNPP HFDLSQP ++IAQYKAG+VPVSYRRVPC R GGIRFTINGHSYFNLVL+TNV GAGDV +V++KG Sbjct: 56 LYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKG 192 HSP 2 Score: 42.3578 bits (98), Expect = 3.158e-53 Identity = 18/37 (48.65%), Postives = 20/37 (54.05%), Query Frame = 3 Query: 108 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 Y GW +AHATFY YGNLYS+GYG Sbjct: 26 YDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYG 62
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.337e-51 Identity = 85/137 (62.04%), Postives = 97/137 (70.80%), Query Frame = 2 Query: 197 LIQRGIWDKHSSSEHCAFHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 L +G ++ F+ G CGACF IKCV+DP+WC G+I VT T+FC GGWCNPPQ HFDL+QP +IAQYKAG+VPV YRRV C R GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG Sbjct: 55 LYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKG 191 HSP 2 Score: 40.0466 bits (92), Expect = 6.337e-51 Identity = 17/37 (45.95%), Postives = 19/37 (51.35%), Query Frame = 3 Query: 108 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 Y GW +A ATFY YGNLYS+GYG Sbjct: 25 YSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYG 61
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.108e-50 Identity = 79/122 (64.75%), Postives = 94/122 (77.05%), Query Frame = 2 Query: 248 FHIGMICGACFDIKCVNDPRWCRPG--SIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 F+ G CGACF+IKCVNDP+WC PG S+FVTAT+FC GGWCNPP+ HFDL+ P +IA+Y+AGIVP+SYRRV C ++GGIRFTINGH YFNLVLITNV GAGD+ S+KG Sbjct: 77 FNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKG 198 HSP 2 Score: 38.5058 bits (88), Expect = 3.108e-50 Identity = 17/36 (47.22%), Postives = 18/36 (50.00%), Query Frame = 3 Query: 111 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 G W AHATFY YGNLYS+GYG Sbjct: 31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYG 66
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.282e-50 Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 2 Query: 248 FHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 F+ G+ CGAC+++KC +DPRWC +I VTAT+FC GGWCNPP QHFDL++PA QIAQY+AGIVPVS+RRVPC + GGIRFTINGHSYFNLVLI+NV GAGDV AVSIKG Sbjct: 73 FNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKG 192 HSP 2 Score: 36.1946 bits (82), Expect = 5.282e-50 Identity = 15/34 (44.12%), Postives = 16/34 (47.06%), Query Frame = 3 Query: 117 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 GW HATFY YGNLY +GYG Sbjct: 29 GWQGGHATFYGGEDASGTMGGACGYGNLYGQGYG 62
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.883e-50 Identity = 81/139 (58.27%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 197 LIQRGIWDKHSSSEHCAFHIGMICGACFDIKCVNDPRWCRPGS--IFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 L +G ++ F+ GM CGACF++KC NDP+WC GS I +TAT+FC GGWCNPP++HFDL+ P +IAQY+AGIVPVSYRRVPC + GGIRFTINGH YFNLVLITNV GAGD+ S+KG Sbjct: 57 LYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKG 195 HSP 2 Score: 39.2762 bits (90), Expect = 6.883e-50 Identity = 17/36 (47.22%), Postives = 19/36 (52.78%), Query Frame = 3 Query: 111 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 G W +AHATFY YGNLYS+GYG Sbjct: 28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYG 63
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.270e-48 Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 2 Query: 248 FHIGMICGACFDIKCVNDPRWCRPG--SIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 F+ G+ CG+CF++KC+NDP WC PG SI +TAT+FC GGWCNPP++HFDL+ P IA+YKAGIVPVSYRR+PC + GGIRFTING YFNLVL+TNV GAGDV VS+KG Sbjct: 75 FNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKG 196 HSP 2 Score: 38.5058 bits (88), Expect = 1.270e-48 Identity = 17/36 (47.22%), Postives = 19/36 (52.78%), Query Frame = 3 Query: 111 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 G W +AHATFY YGNLYS+GYG Sbjct: 29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYG 64
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 1.270e-48 Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 2 Query: 248 FHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 F+ G CGACF+++C +DP WC PGSI V+AT+FC GGWCNPP +HFDL++PA QIAQY+AGIVPV++RRVPC + GGIRFTING+ YF+LVLITNV GAGD+RAVS+KG Sbjct: 75 FNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKG 194 HSP 2 Score: 35.4242 bits (80), Expect = 1.270e-48 Identity = 15/34 (44.12%), Postives = 17/34 (50.00%), Query Frame = 3 Query: 117 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 GW HATFY YGNL+S+GYG Sbjct: 31 GWERGHATFYGGADASGTMGGACGYGNLHSQGYG 64
BLAST of CN188976 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.666e-48 Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 197 LIQRGIWDKHSSSEHCAFHIGMICGACFDIKCVNDPRWCRPGSIFVTATDFCXXXXXXXXXXGGWCNPPQQHFDLSQPALEQIAQYKAGIVPVSYRRVPCTRNGGIRFTINGHSYFNLVLITNVRGAGDVRAVSIKG 607 L +G ++ F+ G CG+C++++C N C PGSI VTAT+FC GGWCNPP+ HFD+++PA IAQY+AGIVPVS+RRVPC + GG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKG Sbjct: 50 LYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186 HSP 2 Score: 40.0466 bits (92), Expect = 3.666e-48 Identity = 19/37 (51.35%), Postives = 20/37 (54.05%), Query Frame = 3 Query: 108 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYG 218 YG GW AHATFY YGNLYS+GYG Sbjct: 21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYG 56 The following BLAST results are available for this feature:
BLAST of CN188976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188976 ID=CN188976; Name=CN188976; organism=Citrus sinensis; type=EST; length=608bpback to top |