EY666132

Overview
NameEY666132
Unique NameEY666132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666132 vs. ExPASy Swiss-Prot
Match: ILV5_ORYSJ (Ketol-acid reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0573700 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.958e-19
Identity = 58/98 (59.18%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   62 AGXNEEKGSLPLYICKLFQDSDLVLLLISDAAQADNSEKIFSCMRTNSIXXXXXXXXXXXXQSMGLDFPTNIGVIAACPKGMTASEKILNVQGKEISG 355
            AG  EE G+L   I +    SDLVLLLISDAAQADN EKIFS M+ NSI            QS GLDFP NI VIA CPKGM  S + L VQGKEI+G
Sbjct:  156 AGFTEESGTLG-DIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 252          
BLAST of EY666132 vs. ExPASy Swiss-Prot
Match: ILV5_PEA (Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.557e-19
Identity = 56/98 (57.14%), Postives = 65/98 (66.33%), Query Frame = 2
Query:   62 AGXNEEKGSLPLYICKLFQDSDLVLLLISDAAQADNSEKIFSCMRTNSIXXXXXXXXXXXXQSMGLDFPTNIGVIAACPKGMTASEKILNVQGKEISG 355
            AG +EEKG+L   I +    SDLVLLLISD+AQADN EKIFS ++ NSI            QS+GLDFP N  VIA CPKGM  S + L VQGKEI+G
Sbjct:  158 AGFSEEKGTLG-DIWETISGSDLVLLLISDSAQADNYEKIFSHLKPNSILGLSHGFLLGHLQSIGLDFPKNFSVIAVCPKGMGPSVRRLYVQGKEING 254          
BLAST of EY666132 vs. ExPASy Swiss-Prot
Match: ILV5_ARATH (Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.557e-19
Identity = 57/98 (58.16%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   62 AGXNEEKGSLPLYICKLFQDSDLVLLLISDAAQADNSEKIFSCMRTNSIXXXXXXXXXXXXQSMGLDFPTNIGVIAACPKGMTASEKILNVQGKEISG 355
            AG  EE G+L   I +    SDLVLLLISDAAQADN EKIFS M+ NSI            QS GLDFP NI V+A CPKGM  S + L VQGKEI+G
Sbjct:  168 AGFTEESGTLG-DIWETIAGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSSGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEING 264          
BLAST of EY666132 vs. ExPASy Swiss-Prot
Match: ILV5_SPIOL (Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 54/104 (51.92%), Postives = 65/104 (62.50%), Query Frame = 2
Query:   44 FCPPFTAGXNEEKGSLPLYICKLFQDSDLVLLLISDAAQADNSEKIFSCMRTNSIXXXXXXXXXXXXQSMGLDFPTNIGVIAACPKGMTASEKILNVQGKEISG 355
            F     AG +EE G+L   + +    SDLVLLLISD+AQADN EK+FS M+ NSI            QS+G DFP NI VIA CPKGM  S + L VQGKE++G
Sbjct:  168 FAEARAAGFSEENGTLG-DMWETISGSDLVLLLISDSAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSLGQDFPKNISVIAVCPKGMGPSVRRLYVQGKEVNG 270          
The following BLAST results are available for this feature:
BLAST of EY666132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ILV5_ORYSJ1.958e-1959.18Ketol-acid reductoisomerase, chloroplastic OS=Oryz... [more]
ILV5_PEA2.557e-1957.14Ketol-acid reductoisomerase, chloroplastic OS=Pisu... [more]
ILV5_ARATH2.557e-1958.16Ketol-acid reductoisomerase, chloroplastic OS=Arab... [more]
ILV5_SPIOL1.657e-1851.92Ketol-acid reductoisomerase, chloroplastic OS=Spin... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666132 ID=EY666132; Name=EY666132; organism=Citrus sinensis; type=EST; length=900bp
CACGGACGGAATTCAAGGGGCGACCCCGCGTCCGCTCTCGTTCTTTTGTC
CCCCTTTTACAGCTGGANNTAATGAAGAGAAAGGAAGTTTGCCCCTATAT
ATATGCAAACTATTTCAGGACAGTGATCTTGTGTTATTATTGATTTCTGA
TGCTGCTCAGGCGGATAATTCTGAGAAGATATTCTCTTGCATGAGAACAA
ACAGCATCCTTGGACTTTCCCATGGGTTCCTTCTTGGGCATTTGCAGTCA
ATGGGACTTGATTTCCCAACAAATATCGGTGTGATTGCTGCGTGTCCCAA
AGGAATGACAGCATCAGAGAAGATACTCAATGTACAAGGCAAAGAAATAA
GTGGAGATTGGAAATAACTCAGGCTTTCCTGTCCTCAACGATGAAGATGA
AAACAACGACCAAAGTCGCACTTCCCACTGTTGTTTAGGGCGGAAAAACA
CATTTCACAGATTGGCCACCACACAAAAGGAAAAACAAATAGCGACACCA
CAGAACTGTCACAGAGCGCTACGACTAGGGGTCAAGAGTGGGAAAAAATC
ACCCAACACTGACGCCCATACTTATAAAACCATATTTTACCCATTTCACA
GTAACATCATACAATCTCCACCCAACCTCATACAACTAAAAATGCAAAAC
CGCGGTCCCAGCCTCAACAAACAGGGCTGCCACGACGCAACCGCTTGTCC
AAGGGTAAGCGCGCAGCAGATTGACAAAACCATATACTACCTGAGGAACC
CTGCGTGTCTCACTACATGCACGAAAACATGCCACACAATTAACCTGCCT
AACTAGACAAACATCCGAAGACTCACTATCAAAACGCATGACAACATGAA
AGTAGTCTACGGAAAGTTACAATCTAAAGCCAATAAAAATAAAACACCTG
back to top