CN188932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: Y194_SYNY3 (Uncharacterized protein sll0194 OS=Synechocystis sp. (strain PCC 6803) GN=sll0194 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.264e-50 Identity = 99/163 (60.74%), Postives = 121/163 (74.23%), Query Frame = -3 Query: 227 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 715 Y G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG+ F+Y+ L PAAL FFV+Y VVE LWSID+YFEFVL+LMFSTGL+FQ+P+I V+S+QML WR+ +LTPSTDP+TQ LLA +LGLYFGG V+L G+ Sbjct: 92 YSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAGLGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFLGIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: YCF43_GUITH (Uncharacterized tatC-like protein ycf43 OS=Guillardia theta GN=ycf43 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40 Identity = 80/158 (50.63%), Postives = 109/158 (68.99%), Query Frame = -3 Query: 242 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGGAWMV 715 Y G+L+ SP I+Y+I+ FVLPG+T+ ER+ L PI++GS +LF G+ F Y++L PA+LNFF+ Y VVE WS +QYFEF+LVL+F T L+FQ+PV+ V+ M SIWRY VLTPS DP+TQ+LL++ +L LYFGGA +V Sbjct: 122 YSGILISSPFIVYQILLFVLPGMTKDERKTLLPIIIGSMILFLLGLIFGYYILVPASLNFFIKYGSDVVEPFWSFEQYFEFILVLLFGTALAFQLPVLQLVLGFLRIVSGKTMFSIWRYVILLSTVVGAVLTPSVDPLTQILLSSIILILYFGGASLV 279
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: YCF43_ODOSI (Uncharacterized tatC-like protein ycf43 OS=Odontella sinensis GN=ycf43 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39 Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = -3 Query: 236 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 715 Y G L GSP + +II F+LPGLT+ E + + P++L S LF G+ FSY+ L PAALNFF+NY++ V+E LWS DQYFEF+LVL +STGL+FQ+P+I +++ QML+ WRY +LTPSTDP+TQ+LL+ +L LYF G ++ L Sbjct: 101 YTGFLFGSPFAIGQIILFLLPGLTKKETKIILPLLLSSLGLFGFGLVFSYYALIPAALNFFLNYSDEVIEPLWSFDQYFEFILVLFYSTGLAFQIPIIQILLGLLNIISAKQMLAAWRYIILVSTIIGAILTPSTDPLTQLLLSIAILMLYFSGVGILFL 260
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: YCF43_PORPU (Uncharacterized tatC-like protein ycf43 OS=Porphyra purpurea GN=ycf43 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = -3 Query: 254 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGG 715 YCG++ +P +Y++I ++LPGLT ER+ + PI++GS VLF G F+Y+VL PAALNF ++Y +VE LWS +QYF+F+L+L+FSTGL+F++P+I V++ QML WRY VLTPSTDPVTQ+++++ +L LYF G Sbjct: 92 YCGIVATTPFGVYQVILYILPGLTNKERKVILPILIGSIVLFIVGGIFAYFVLAPAALNFLISYGADIVEPLWSFEQYFDFILLLLFSTGLAFEIPIIQLLLGISGTVSASQMLLAWRYIIIISTIIGAVLTPSTDPVTQIIMSSAVLALYFSG 245
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: YCF43_GRATL (Uncharacterized tatC-like protein ycf43 OS=Gracilaria tenuistipitata var. liui GN=ycf43 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.341e-38 Identity = 69/163 (42.33%), Postives = 107/163 (65.64%), Query Frame = -3 Query: 227 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 715 Y G LL SP I+Y+I F+LPGLT+ E F+ PI+ S +LF++GI F+Y +L PAAL F +NY +VE +WS +QYF F+L+L+FSTG++FQ+P+I +S +M + W+Y ++TPSTDP+TQ++++ +L LY G ++K+ + Sbjct: 76 YSGFLLSSPFIIYQITLFILPGLTKKESNFIVPILFISIILFFSGIVFAYIILVPAALKFLINYGNEIVEPIWSFEQYFNFILLLLFSTGIAFQIPIIQVILGILKIFSSSEMYAYWKYIVLGATVIAAIITPSTDPITQIIMSIAILALYSSGIIILKILNK 238
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: YCF43_PORYE (Uncharacterized tatC-like protein ycf43 OS=Porphyra yezoensis GN=ycf43 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.406e-37 Identity = 68/154 (44.16%), Postives = 105/154 (68.18%), Query Frame = -3 Query: 254 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGG 715 YCG++ +P +Y++I ++LPGLT ER+ + P+++ S +LF G F+Y+VL PAAL F ++Y +VE LWS +QYF+F+L+L+ STGL+F++P+I +S QM+ WRY +LTPSTDPVTQ+++++ +L LYFGG Sbjct: 92 YCGIVATTPFAVYQVILYILPGLTGKERKIILPLLISSVLLFITGGIFAYFVLAPAALTFLISYGSDIVEPLWSFEQYFDFILLLLLSTGLAFEIPIIQLLLGVSGTFSSSQMIRAWRYIIIIATIAGAILTPSTDPVTQLIMSSAVLLLYFGG 245
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: YCF43_CYACA (Uncharacterized tatC-like protein ycf43 OS=Cyanidium caldarium GN=ycf43 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.406e-37 Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = -3 Query: 236 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 715 Y G++L SP+I YEII F++PGLT+ ERR L PI++ S LF AG+ F Y +TP A+ FF+NY + ++E +WS +YF+F+++ +FST +SFQ+P+ + S MLS+WRY ++TPSTDP+ Q+ L+ ++ LYF ++KL Sbjct: 77 YLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVAGLIFGYIYITPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGSLKIINSKMMLSVWRYVVVGSTIFSAIITPSTDPLIQLFLSVAVMFLYFSSILVLKL 236
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: TATC_ECOLI (Sec-independent protein translocase protein tatC OS=Escherichia coli (strain K12) GN=tatC PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = -3 Query: 263 LLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLY 706 L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P A F N A V+ I Y FV+ L + G+SF+VPV + + + Y +LTP D +Q LLA P+ L+ Sbjct: 80 LILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTP-PDVFSQTLLAIPMYCLF 226
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: TATC_ECOL6 (Sec-independent protein translocase protein tatC OS=Escherichia coli O6 GN=tatC PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = -3 Query: 263 LLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLY 706 L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P A F N A V+ I Y FV+ L + G+SF+VPV + + + Y +LTP D +Q LLA P+ L+ Sbjct: 80 LILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTP-PDVFSQTLLAIPMYCLF 226
BLAST of CN188932 vs. ExPASy Swiss-Prot
Match: TATC_ECO57 (Sec-independent protein translocase protein tatC OS=Escherichia coli O157:H7 GN=tatC PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = -3 Query: 263 LLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXVTSDQMLSIWRYXXXXXXXXXXVLTPSTDPVTQMLLAAPLLGLY 706 L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P A F N A V+ I Y FV+ L + G+SF+VPV + + + Y +LTP D +Q LLA P+ L+ Sbjct: 80 LILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTP-PDVFSQTLLAIPMYCLF 226 The following BLAST results are available for this feature:
BLAST of CN188932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188932 ID=CN188932; Name=CN188932; organism=Citrus sinensis; type=EST; length=717bpback to top |