CN182115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 7.379e-53 Identity = 104/124 (83.87%), Postives = 105/124 (84.68%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNAS NELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR 124
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 7.379e-53 Identity = 104/124 (83.87%), Postives = 105/124 (84.68%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNAS NELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR 124
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.644e-52 Identity = 103/124 (83.06%), Postives = 106/124 (85.48%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDSMH YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTR+LDVVYNAS NELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR 124
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 9.020e-51 Identity = 102/124 (82.26%), Postives = 104/124 (83.87%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDS+H YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTRILDV YNAS NELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGR 124
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.178e-50 Identity = 98/124 (79.03%), Postives = 104/124 (83.87%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDS+H YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTR+LDVVYNAS NELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGR 124
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_THEPA (40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.817e-36 Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDS H YELGR +NTKL S K VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS NELVRT+TLVK+AIV VD PFK W+ HYG+++G+ Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-KLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 1.070e-35 Identity = 73/124 (58.87%), Postives = 88/124 (70.97%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRD+ H YELGR P+NTKL K + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNAS NELVRT+TLVK+ ++ VD+APF+QWY HY + +GR Sbjct: 1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGR 123
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_THEAN (40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.385e-35 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 427 MGISRDS H YELGR +NTKL S + VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS NELVRT+TLVK+AIV VD PFK W+ HYGV++ Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-RLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGVEL 121
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.385e-35 Identity = 74/124 (59.68%), Postives = 89/124 (71.77%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRDS H YELGRQPA TK+ K VR +RVRGGN+K RALRL++GN++WGSEA T K+RIL+VVYNAS NELVRT T VK I+Q+DA PF+Q+Y HYG+DIG+ Sbjct: 1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGK 123
BLAST of CN182115 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.938e-35 Identity = 74/127 (58.27%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 62 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSN---KTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASYNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 433 MGISRD++H YELGRQ A TK+ S K VR IRVRGG+ K+RALRLDTGN+SW +E +TRK RIL+VVYNA+ N+LVRT TLVK +IVQ+DA P+KQWY HYGV +G+ Sbjct: 1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK 127 The following BLAST results are available for this feature:
BLAST of CN182115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182115 ID=CN182115; Name=CN182115; organism=Citrus sinensis; type=EST; length=496bpback to top |