CN182112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_HUMAN (15 kDa selenoprotein OS=Homo sapiens GN=SEP15 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 50/147 (34.01%), Postives = 81/147 (55.10%), Query Frame = -2 Query: 283 VLFIVIISAVAVTSKEQLSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 720 +L ++ AV+ E S+ C +LGF+ LCS C+ ++ Q L DC CC E++ K+ Y+GAILE C KL +P++ F+ +K K F ++++YV S P L +LD+ G E + I W + + +FL EK++ Sbjct: 17 LLLATVLQAVSAFGAE-FSSEACRELGFSSNLLCSSCDLLGQFNLLQ-LDPDCRGCCQEEAQFETKKL-YAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLE 160
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_BOVIN (15 kDa selenoprotein OS=Bos taurus GN=SEP15 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 49/147 (33.33%), Postives = 80/147 (54.42%), Query Frame = -2 Query: 283 VLFIVIISAVAVTSKEQLSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 720 +L ++ V+ E S+ C +LGF+ LCS C+ ++ Q L DC CC E++ K+ Y+GAILE C KL +P++ F+ +K K F ++++YV S P L +LD+ G E + I W + + +FL EK++ Sbjct: 17 LLLATVLQTVSALGAE-FSSESCRELGFSSNLLCSSCDLLGQFNLLQ-LDPDCRGCCQEEAQFETKKL-YAGAILEVCGUKLGRFPQVQAFVRSDKPKLFKGLQIKYVRGSDPVLKLLDDSGNIAEELSILKWNTDSVEEFLSEKLE 160
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_DANRE (15 kDa selenoprotein OS=Danio rerio GN=sep15 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = -2 Query: 283 QLSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 672 +LS+ C +LGF+ LCS C ++ +Q L C +CC E++ K+ Y GAILE C KL +P++ F+ +K K F ++++YV S P L +LD+ G E + I W + + +FL EK++ Sbjct: 23 ELSSEACRELGFSSNLLCSSCELLGQFSLNQ-LDLPCRQCCQEEAQLENRKL-YPGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLE 151
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_PIG (15 kDa selenoprotein OS=Sus scrofa GN=SEP15 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16 Identity = 45/131 (34.35%), Postives = 73/131 (55.73%), Query Frame = -2 Query: 283 QLSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 672 + S+ C +LGF+ LC C+ ++ Q L DC CC E++ K+ Y+GAILE C KL +P++ F+ +K K F ++++YV S P L +LD+ G E + I W + + +FL EK++ Sbjct: 32 EFSSESCRELGFSSNLLCGSCDLLGQFDLLQ-LDPDCRGCCQEEAQFETKKL-YAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLQ 160
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_RAT (15 kDa selenoprotein OS=Rattus norvegicus GN=Sep15 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = -2 Query: 283 VLFIVIISAVAVTSKEQLSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 720 +L AV+ E S+ C +LGF+ LCS C+ ++ L C CC E++ K+ Y+GAILE C KL +P++ F+ +K K F ++++YV S P L +LD+ G E + I W + + +FL EK++ Sbjct: 17 LLLATAFQAVSALGAE-FSSEACRELGFSSNLLCSSCDLLGQF-NLLPLDPVCRGCCQEEAQFETKKL-YAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLE 160
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_MOUSE (15 kDa selenoprotein OS=Mus musculus GN=Sep15 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 47/147 (31.97%), Postives = 77/147 (52.38%), Query Frame = -2 Query: 283 VLFIVIISAVAVTSKEQLSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 720 +L AV+ E ++ C +LGF+ LCS C+ ++ L C CC E++ K+ Y+GAILE C KL +P++ F+ +K K F ++++YV S P L +LD+ G E + I W + + +FL EK++ Sbjct: 17 LLLATAFQAVSALGAE-FASEACRELGFSSNLLCSSCDLLGQF-NLLPLDPVCRGCCQEEAQFETKKL-YAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLE 160
BLAST of CN182112 vs. ExPASy Swiss-Prot
Match: SEP15_ONCMY (15 kDa selenoprotein OS=Oncorhynchus mykiss GN=sep15 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.021e-13 Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = -2 Query: 283 LSTRECEDLGFTGLALCSDCNTFAEYVKDQELVADCLKCCTEDSDDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 669 LS+ C +LGF+ CS C+ E+ + C +CC ++ K+ Y GAILE C KL +P++ F+ +K K F ++++YV + P L +LD+ G E I W + + +FL EK++ Sbjct: 24 LSSEACRELGFSSCWGCSSCDLLGEFSLSS-IQPVCKQCCQQEVHMESRKL-YPGAILEVCGUKLGRFPQVQAFVRSDKPKMFKGLQIKYVRGADPILKLLDDNGNIAEEPSILKWNTDSVEEFLSEKLE 151 The following BLAST results are available for this feature:
BLAST of CN182112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182112 ID=CN182112; Name=CN182112; organism=Citrus sinensis; type=EST; length=796bpback to top |