CN182062

Overview
NameCN182062
Unique NameCN182062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5726 contig Csv1_Contig5726:858..1491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.198e-111
Identity = 201/210 (95.71%), Postives = 201/210 (95.71%), Query Frame = 2
Query:    5 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKT        PQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSAT AVVGEGFL
Sbjct:  153 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFL 362          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 5.035e-110
Identity = 199/210 (94.76%), Postives = 199/210 (94.76%), Query Frame = 2
Query:    5 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKL EETSTVDGWPAWLS GDRRLLQSSSVTPN VVAADGSGNFKT        PQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL
Sbjct:  153 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 362          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 3.642e-76
Identity = 153/229 (66.81%), Postives = 166/229 (72.49%), Query Frame = 2
Query:    5 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMR-----TSNNRKLTEE----TSTVD----------GWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            H+ VEDL  YP KK+L +HA DLKTL+S+A+TNQ TCLDGFSHDDA+K VR AL  GQ+HVE MCSNALAMIKNMTDTD+         TSNNRKL EE    T  VD          GWP WLS GDRRLLQ S V  +A VAADGSG FKT        P+   KRY+I IKAGVYRENVEV KK KNIMF+GDGRTRTIITGSRNVVDGSTTF SATVA VGE FL
Sbjct:  142 HETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFL 370          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 7.594e-74
Identity = 144/221 (65.16%), Postives = 166/221 (75.11%), Query Frame = 2
Query:    5 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMM---------IMRTSNNRKLTEETSTVD--GWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            H AVEDL +YP +KSL +HADDLKTL+S+A+TNQGTCLDGFS+DDA++ VR AL  GQVHVE MCSNALAMIKNMT+TD+              +NNRKL E T  +D  GWP WLS GDRRLLQ S++  +A VA DGSG+F T        P+   KR++I IKAGVYRENVEVTKK  NIMF+GDGR +TIITGSRNVVDGSTTF SATVA VGE FL
Sbjct:  145 HVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFL 365          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.068e-71
Identity = 139/209 (66.51%), Postives = 160/209 (76.56%), Query Frame = 2
Query:    5 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTD----MMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVV 619
            H AVEDLE YPNKKSL +H +DLKTL+S+A+TNQ TCLDGFSHD+A+K VR  L  GQ HVEKMCSNALAMI NMTDTD    M +   +NNRKL E+      WP WLS GDRRLLQSS+VTP+ VVAADGSG++KT        P+  +KRY+IRIKAGVYRENV+V KK  NIMF+GDG++ TIIT SRNV DGSTTF SATV  V
Sbjct:  151 HTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGE---WPEWLSAGDRRLLQSSTVTPDVVVAADGSGDYKTVSEAVRKAPEKSSKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRV 356          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.654e-36
Identity = 87/203 (42.86%), Postives = 121/203 (59.61%), Query Frame = 2
Query:   35 PNKK--SLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVT-PNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            PN K  S      DL+T +SAA++NQ TCLDGF  +  N  ++  ++ G   V     N L M+ +         +    + +T+  S    +P+W+ PGDR+LLQ+ ++T  +AVVAADG+GNF T        P   TKRY+I +K GVY ENVE+ KK  NIM +GDG   T+ITG+R+ +DG TTF+SAT AV G GF+
Sbjct:  105 PNGKDNSTGDVGSDLRTWISAALSNQDTCLDGF--EGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSKPKP--KPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFI 303          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31
Identity = 84/189 (44.44%), Postives = 110/189 (58.20%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D +T +S A+TN  TC          ++V   LS+   +V K+ SN L++                N+    E S  DG+P W+ PGDR+LLQ++    N VVA DGSGN KT         + G  RY+I IKAG Y EN+EV  K KNIMF+GDG  +TIITGS++V  G+TTFKSATVAVVG+ F+
Sbjct:  123 DKQTWLSTALTNLETCRASLEDLGVPEYVLPLLSN---NVTKLISNTLSL----------------NKVPYNEPSYKDGFPTWVKPGDRKLLQTTP-RANIVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTYNENIEV--KLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFI 289          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31
Identity = 68/97 (70.10%), Postives = 76/97 (78.35%), Query Frame = 2
Query:  344 QSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            QSS+VTPN VVAADGSG++KT        P+    RY+IRIKAGVYRENV+V KK KNIMF+GDGRT TIIT S+NV DGSTTF SATVA VG GFL
Sbjct:    1 QSSTVTPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFL 97          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.951e-31
Identity = 76/199 (38.19%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   41 KKSL-SQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            KK+L S    DL T +S+A+T+ GTC D    D+ N  +   L    V+  +  SN+LA++  +             R+L    S    +P W+ PG RRLLQ+ ++TP+  VAADGSG+ +T        P+ G   ++I +KAG Y ENV + K   N+   GDGR +TII+GS N+VDG  TF ++T A  G+GF+
Sbjct:  555 KKNLNSSTIGDLITWLSSAVTDIGTCGDTLDEDNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQGRRLLNSNS----FPNWVRPGVRRLLQAKNLTPHVTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFM 749          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.038e-30
Identity = 76/192 (39.58%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS---SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +LKT +SAAM+NQ TCL+GF  +   +   + +      V ++ SN L M    T  + +  + S N  +          P WL+  D  L+     S + PN VVA DG G ++T        P   TKRY+I +K GVY+EN+++ KK  NIM +GDG  +TIITG RN + G TTF++ATVAV G GF+
Sbjct:  150 NLKTWLSAAMSNQDTCLEGF--EGTERKYEELIKGSLRQVTQLVSNVLDMY---TQLNALPFKASRNESVIAS-------PEWLTETDESLMMRHDPSVMHPNTVVAIDGKGKYRTINEAINEAPNHSTKRYVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQGLTTFRTATVAVSGRGFI 329          
The following BLAST results are available for this feature:
BLAST of CN182062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME1_CITSI1.198e-11195.71Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_CITSI5.035e-11094.76Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME3_ARATH3.642e-7666.81Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH7.594e-7465.16Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PMEU1_SOLLC2.068e-7166.51Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME32_ARATH1.654e-3642.86Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME2_CITSI1.227e-3144.44Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME_DAUCA2.733e-3170.10Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME26_ARATH7.951e-3138.19Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME22_ARATH1.038e-3039.58Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182062 ID=CN182062; Name=CN182062; organism=Citrus sinensis; type=EST; length=634bp
GAGGCACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTT
TATCACAGCATGCGGATGATCTCAAAACCTTAATGAGTGCCGCGATGACC
AATCAGGGGACGTGTCTTGATGGGTTCTCGCATGATGATGCTAATAAGCA
CGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATGTTGAGAAGATGTGTA
GCAATGCGCTTGCTATGATCAAGAACATGACGGACACTGACATGATGATC
ATGAGGACTTCAAACAACAGGAAGCTGACAGAGGAGACCAGTACGGTTGA
TGGGTGGCCGGCGTGGCTGTCCCCCGGCGACAGGAGGCTGTTGCAGTCCT
CGTCGGTGACACCGAACGCGGTGGTGGCGGCAGATGGCAGCGGAAACTTT
AAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCAGGGAGGCACTAAGCG
GTATATTATTAGGATTAAAGCTGGTGTTTATCGGGAAAATGTTGAGGTGA
CAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGAAGGACTAGAACT
ATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAGTC
TGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTG
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