CN188867

Overview
NameCN188867
Unique NameCN188867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1800..2506. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50
Identity = 96/110 (87.27%), Postives = 104/110 (94.55%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R LQRT+PAAVPA+VFLSGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+AAFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  249 RTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.147e-47
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            RALQRT+PAAVPAVVFLSGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  250 RALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.124e-45
Identity = 92/110 (83.64%), Postives = 98/110 (89.09%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R LQRT+PAAVPAV+FLSGGQSEEEATRNLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+AAFL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  249 RTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45
Identity = 90/110 (81.82%), Postives = 98/110 (89.09%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            RALQRT+PAAVPAVVFLSGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  250 RALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R LQRT+P AVP V+FLSGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  249 RTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+PAAVP +VFLSGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  250 ALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32
Identity = 70/109 (64.22%), Postives = 82/109 (75.23%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P A+P +VFLSG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  250 ALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 64/109 (58.72%), Postives = 81/109 (74.31%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  258 ALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 62/109 (56.88%), Postives = 76/109 (69.72%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+PAAVP + FLSGGQSEEEA+ NLNAMNQL   +PW LSFS+GRALQ S L AW G+  N + +Q AF+ R K NS A+ G YK   Q G+ + +SL    Y Y
Sbjct:  256 ALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 65/109 (59.63%), Postives = 80/109 (73.39%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  256 ALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
The following BLAST results are available for this feature:
BLAST of CN188867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ4.213e-5087.27Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR1.147e-4785.45Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE3.124e-4583.64Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA9.090e-4581.82Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL4.668e-4177.27Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA7.453e-3974.31Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH3.033e-3264.22Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_CAEEL8.260e-3058.72Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOB_DANRE1.193e-2856.88Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALF_ECHMU1.558e-2859.63Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188867 ID=CN188867; Name=CN188867; organism=Citrus sinensis; type=EST; length=705bp
GCAGGTTTTTGTCAAAATACCTCTTCATTTATTCAGTGAATCAGCCAAGA
TATAATCACATGTGAGAAAGCAACGCATTAGAAAAGAACCGAAAGCAATA
AGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTTAGCG
CCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATAAACAGTTT
TCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTT
ATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAATGTGC
CAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACA
ACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGA
GACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAG
GGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCT
TCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGA
AGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAG
CTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCAC
CAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGG
GCCCG
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