CN182046

Overview
NameCN182046
Unique NameCN182046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYA_RICCO (Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.600e-46
Identity = 99/181 (54.70%), Postives = 125/181 (69.06%), Query Frame = -1
Query:  155 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTI 697
            AVRQ ADALMLSGESA+G + +KA++VL+  S R+E W REE    A+     +G +  D I+E+ICN A  MANNLGVDA+FVYTK GHMASLLSR RP+ PIFAFT   S R  LNLQWG+IP  ++ +DDME+N+ KT  L+K +GM+K GD V+ V D+          QSIQV  +
Sbjct:  412 AVRQRADALMLSGESAMGQYPEKALAVLRSVSVRIEKWWREEKHHEAM-ELPAIGSTYSDSISEEICNSAAKMANNLGVDALFVYTKDGHMASLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLIPFRLSFADDMESNLNKTFSLLKARGMIKSGDLVIAVSDM---------LQSIQVMNV 582          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYA_TOBAC (Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.672e-43
Identity = 95/181 (52.49%), Postives = 122/181 (67.40%), Query Frame = -1
Query:  155 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTI 697
            AVRQ  DALMLSGESA+G F +KA++VL+  S R+E   RE+ R   +     +  S  D I+E+ICN A  MANNL VDA+FVYTK+GHMASLLSR RP+ PIFAFT   S R  LNLQWG++P  ++ SDDME+N+ KT  L+K +GM+K GD ++ V D+          QSIQV  +
Sbjct:  422 AVRQRGDALMLSGESAMGQFPEKALTVLRSVSLRIERMWREQKRHEVI-ELPSIASSFSDSISEEICNSAAKMANNLEVDALFVYTKNGHMASLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLMPFRLSFSDDMESNLNKTFSLLKARGMIKSGDLIIAVSDM---------LQSIQVMNV 592          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYG_TOBAC (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 58/160 (36.25%), Postives = 86/160 (53.75%), Query Frame = -1
Query:  218 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVV 697
            AVR+ ADA+MLSGE+A G +  KAV V+ + + R E      + Q +     Q   +    + E     +  MAN L    I V+T+ G MA +LS NRP+  +FAFTN++  +  L L  GV+P+ +  S D E   ++ I L+  K +VK G  V +V
Sbjct:  387 AVREGADAVMLSGETAHGKYPLKAVKVMHIVALRTE-----SSLQKSTSSPSQ-SAAYKSHMGEMFAFHSSSMANTLSTP-IIVFTRTGSMAIILSHNRPSSTVFAFTNNERVKQRLALYHGVVPIYMEFSSDAEETFSRAIKLLLSKSLVKDGQYVTLV 539          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYG_RICCO (Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 57/160 (35.62%), Postives = 83/160 (51.88%), Query Frame = -1
Query:  218 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVV 697
            AVR+ ADA+MLSGE+A G +  KAV V+   + R E  S       A    +         + E     A  MAN L    I V+T+ G MA LLS  +P   IFAFTN++  +  L+L  GV+P+ +  S D E   ++ + L+  KG++  G+ V +V
Sbjct:  244 AVREGADAVMLSGETAHGKYPLKAVRVMHTVALRTESSSPVNTTPPAQGAYK-------GHMGEMFAFHATIMANTLNTP-IIVFTRTGSMAVLLSHYQPASTIFAFTNEERIKQRLSLYRGVMPIYMEFSSDAEETFSRALQLLLNKGLLVEGEHVTLV 395          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 55/178 (30.90%), Postives = 83/178 (46.63%), Query Frame = -1
Query:  164 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 697
            AV    DA MLSGESA G +  ++V  +     R E   +E + ++ L  QR   E     + E I    V  A  LGV  I   T  G+ A ++S+ RP+  I A T D+  + +L + WGV PVL     + +    +   + K  G VK GD V++V  +      +T    +Q+
Sbjct:  302 AVLDGTDATMLSGESANGLYPVQSVQAMHDIDVRTE---KELDTRNTLALQR-FEEYKGSNVTEAIGESVVRTAQELGVKTIIAATSSGYTARMISKYRPDATIVALTFDEKIQHSLGIVWGVEPVLAKKPSNTDEMFEEAARVAKEHGFVKDGDLVIIVAGVPFGQSGTTNLMKLQI 475          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12
Identity = 48/159 (30.19%), Postives = 81/159 (50.94%), Query Frame = -1
Query:  221 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLV 697
            A+    DA+MLSGE+A G +  +AV  +   +SR E     +   SA    +Q+  S+ D I + + + A+    NL V+AI   T+ GH A ++S+ RP  PI A T +D+    L+L +GV           +  + K +      G+V++GD +++
Sbjct:  301 AIFDGTDAIMLSGETAAGNYPVEAVQTMHNIASRSEEALNHKKILSAR--SKQVSMSITDAIGQSVAHTAI----NLDVNAIVTPTESGHTARMISKYRPQAPIVAVTVNDAVSRKLSLVFGVFATSGQNHSSTDEMLEKAVQKSLDTGIVRHGDLIVI 453          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYK1_SYNY3 (Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=pyk1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 50/177 (28.25%), Postives = 81/177 (45.76%), Query Frame = -1
Query:  170 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLS-DDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSI 697
            A+    DA+MLSGESA+G +  K+V +L+  +   E+     N              + +     +    V +   L +  I  +T  G  + L S  RP+ P+ AFT  +    +LNL WG+IP L+N   D  E  I +   L++ + MV+ GD +L++  +       T F  I
Sbjct:  314 AILDGTDAVMLSGESAVGQYPVKSVQMLRKIAEETEVGLHLVNNPP-----------IENTETHALSEALVVIDGILDLKYIVTFTTSGFTSLLASNQRPSVPVIAFTPSEKVYHSLNLVWGIIPFLINEEFDTFEDLIQQAEVLLRDRKMVEKGDQLLIMAGIPTKIPRGTNFLKI 479          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYK_LACLA (Pyruvate kinase OS=Lactococcus lactis subsp. lactis GN=pyk PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = -1
Query:  218 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLV---NLSDDMETNIAKTIDLIKMKGMVKYGDAVLVV 697
            AV    DA MLSGESA G + +++V  +   +   +   +E  R   L  +R    ++ + +A  + N A  M     +  I   T+ G+ A L+S++RPN  I A T D+     L + WGVIP +    + +DDM   +A+ + L    G+V+ GD +++V
Sbjct:  331 AVIDGTDATMLSGESANGKYPRESVRTMATVNKNAQTMLKEYGR---LHPERYDKSTVTEVVAASVKNAAEAM----DIKLIVALTESGNTARLISKHRPNADILAITFDEKVERGLMINWGVIPTMTEKPSSTDDM-FEVAEKVAL--ASGLVESGDNIIIV 483          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = -1
Query:  221 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQR-QLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLV 697
            A+    DA+MLSGE+A G +  +AV  +   +SR E      N +  L  +R Q+G ++ D I + + + A+    NL   AI   T+ GH A ++++ RP  PI A T +DS    L L  GV       +   +  +   +      G+VK+GD +++
Sbjct:  301 AIFDGTDAIMLSGETAAGSYPVEAVQTMHNIASRSE---EALNYKEILSKRRDQVGMTITDAIGQSVAHTAI----NLNAAAIVTPTESGHTARMIAKYRPQAPIVAVTVNDSISRKLALVSGVFAESGQNASSTDEMLEDAVQKSLNSGIVKHGDLIVI 453          
BLAST of CN182046 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 51/181 (28.18%), Postives = 85/181 (46.96%), Query Frame = -1
Query:  164 AVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVI---PVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 697
            A+    DA+MLSGE+A G +  +AV  +   + R E     E+R       ++   ++ D I + + + A+    NL V AI   T  G    ++++ RP  PI A T++++    L L WGV       VN +D+M   +   +D     G+VK+GD V++   +      ST    + V
Sbjct:  302 AIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTE--QALEHRDILSQRTKESQTTITDAIGQSVAHTAL----NLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEM---LDVAVDAAVRSGLVKHGDLVVITAGVPVGETGSTNLMKVHV 473          
The following BLAST results are available for this feature:
BLAST of CN182046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
KPYA_RICCO3.600e-4654.70Pyruvate kinase isozyme A, chloroplastic OS=Ricinu... [more]
KPYA_TOBAC1.672e-4352.49Pyruvate kinase isozyme A, chloroplastic OS=Nicoti... [more]
KPYG_TOBAC3.176e-1836.25Pyruvate kinase isozyme G, chloroplastic OS=Nicoti... [more]
KPYG_RICCO5.070e-1635.63Pyruvate kinase isozyme G, chloroplastic (Fragment... [more]
KPYK_LACDE8.094e-1430.90Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK_BACLI1.169e-1230.19Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK1_SYNY37.576e-1228.25Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC... [more]
KPYK_LACLA3.760e-1130.67Pyruvate kinase OS=Lactococcus lactis subsp. lacti... [more]
KPYK_BACSU3.760e-1130.00Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_BACST3.760e-1128.18Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182046 ID=CN182046; Name=CN182046; organism=Citrus sinensis; type=EST; length=697bp
CCCCGGGCTGCAGGTCAAATTTCACACTGAAGTGTATTTTGCGTCTAGAG
GAACAAGCTTTCATATCACAATGAGCATAGCAGAGTTAAGCAAGAACACG
TAGCATTTGACAGCACATACTTTTTGTTTTCCCTAAGAAAGTTTTACCCT
AAACGATTGTCTTCACCTGGATTGATTGGAATGCTGTTGAAGTAACATGA
GCTGGAGTTAAATCCAAGACTACTAGAACAGCATCCCCGTATTTCACCAT
CCCCTTCATTTTTATAAGATCTATGGTTTTCGCGATGTTAGTTTCCATGT
CATCTGATAAATTGACTAGTACGGGAATAACCCCCCATTGCAAGTTCAGA
GCCATCCGGGTGCTGTCATCATTTGTGAATGCAAATATGGGAGGGTTTGG
ACGGTTGCGGGACAGAAGAGACGCCATATGGCCATGCTTAGTATAGACAA
AAATGGCATCCACTCCGAGGTTGTTAGCCATATCAACAGCGCAATTGCAG
ATCTGCTCAGCAATGCGATCATGCAGTGATTCACCTAACTGACGCTGTCC
ACAAAGAGCACTTTGTCGGTTTTCCTCACGACTCCATAGTTCCATTCGAC
TACTGGCCATCTGCAGGACAGAGACAGCCTTCTGTCCAAATGGTCCAATT
GCAGATTCTCCAGACAACATCAAGGCATCTGCATATTGTCTAACTGC
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