CN182032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.946e-46 Identity = 87/160 (54.37%), Postives = 111/160 (69.38%), Query Frame = 2 Query: 92 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIR-QVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AA+AFPGFG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYCY+R Q SP + +YYGRGPIQ+++N NY + G+A+GVDL+NNP Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNP 203
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.564e-46 Identity = 85/158 (53.80%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 92 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AA+A+P FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYC++R+ +P++ QYYGRGPIQ++WN NY +CG A+GVDLLN P Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKP 213
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.564e-46 Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 2 Query: 146 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 G+L IISR F+D+L +RND CPARGFYTYDAFI AA++FPGFG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYC+ ++ +P+S+ G+ YYGRGP+QL+WN NY +CG A+G DLLNNP Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNP 209
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 182.956 bits (463), Expect = 1.120e-45 Identity = 83/141 (58.87%), Postives = 103/141 (73.05%), Query Frame = 2 Query: 146 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 G+L IIS F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYC+ ++ +PAS G +YYGRGP+QL+WN NY CG A+GVDLLNNP Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNP 224
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.910e-45 Identity = 86/163 (52.76%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 92 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AA+A+P FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYC++R+ +P++ QYYGRGPIQ++WN NY +CG A+GVDLLN P Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKP 212
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.320e-45 Identity = 89/161 (55.28%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 92 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GRGPIQ++ N NY CG A+GVDLLNNP Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNP 213 HSP 2 Score: 22.3274 bits (46), Expect = 4.320e-45 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 564 PDLLATDPVL 593 PDL+ATDPV+ Sbjct: 213 PDLVATDPVI 222
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.320e-45 Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 110 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AA++FP F +G++ RKRE+AAF AQT HETTG GW AP G Y WGYCY R+++PA QY+GRGP+QLTWN NY +CG A+GVDLLNNP Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNP 210 HSP 2 Score: 21.9422 bits (45), Expect = 4.320e-45 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 564 PDLLATDPVL 593 PDLLATDP + Sbjct: 210 PDLLATDPTI 219
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 7.335e-45 Identity = 83/142 (58.45%), Postives = 101/142 (71.13%), Query Frame = 2 Query: 143 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GRGPIQ++ N NY CG A+GVDLLNNP Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNP 218 HSP 2 Score: 22.3274 bits (46), Expect = 7.335e-45 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 564 PDLLATDPVL 593 PDL+ATDPV+ Sbjct: 218 PDLVATDPVI 227
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.112e-44 Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 2 Query: 125 TGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FP F +G++ RKREIAAF AQT HETTG GW AP G YAWGYCY R+++P SS PG QY+GRGP+QL+WN NY +CG A+GVDLLNNP Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNP 191
BLAST of CN182032 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.112e-44 Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 2 Query: 125 TGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNP 565 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FP F +G++ RKREIAAF AQT HETTG GW AP G YAWGYCY R+++P SS PG QY+GRGP+QL+WN NY +CG A+GVDLLNNP Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNP 213 The following BLAST results are available for this feature:
BLAST of CN182032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182032 ID=CN182032; Name=CN182032; organism=Citrus sinensis; type=EST; length=629bpback to top |