CN188849

Overview
NameCN188849
Unique NameCN188849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN188849 vs. ExPASy Swiss-Prot
Match: PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = -2 
Query:  602 KVTFGTLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 745
            K+TF TLY+GLIQS+ +RTWRRLKKKLDEESITFGSEFQ Y F+PY+R
Sbjct:  462 KLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPFEPYKR 509
The following BLAST results are available for this feature:
BLAST of CN188849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PP150_ARATH9.697e-1679.17Pentatricopeptide repeat-containing protein At2g13... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0006O11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188849 ID=CN188849; Name=CN188849; organism=Citrus sinensis; type=EST; length=746bp
TTTTTTTTCTTCAAAATCTGCCATTTGAGATTTCTTCATTTCACATTCCC
CTTGGGGATGACTGAGTAATTTACTCCAAAACTTGAGAACACATAAAAGG
ATTGAACAAAATAAAAAGACTGACAAAAATGGCAGCAACTCATCTGCTTT
TGCGGGTTTAGCTCAACTTTCATTGCTGGGCCCGCCAGCAGCTAAGCTAG
CTGATATGGCATATTTTGCAGCTTACTCATATCAATTCAAGACCCCGTAA
TCTGTTCTCAGTTGTTAAGTAATCTGCTTTGTGGGTTATGCAATGGCAAA
ACCACCAGATACTACTGATACACGAAGCTCAAAAACAAACAGGTTTCTGC
ATTCTATTAATTTGCCAGCAGTTTTCTTCTTCCATTCCCCCCCGACCAAC
AGCTAGCTGTCTCTTTTCAGTTGAGTTGCTGCTTCTTTTTATTCTTCCAT
ACCCTTCATTTAGTTATAAACCTCAAGGTACGTGACCCAAAACCTTTTTA
CAGGCAAAAGCCAGGAAATCCACCATTTTGGGTATTGGTCCCTTGGTAAA
AGTCCTCATGAGCTGAAGATTTTATTCAAGTTGCAAGGACATGGTGTATC
ATCTCCTGTATGGTTTAAAGTGATAATTTTGAAACTCAGAACCAAAAGTA
ATTGACTCTTCATCAAGCTTCTTCTTCAATCTTCTCCATGTTCTCAACAT
ATCGGATTGTATTAAGCCCCTATAGAGTGTTCCAAAAGTAACTTTT
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