CN188844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188844 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.119e-42 Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = -1 Query: 318 NVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXPHAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 698 N+A + +GKCGIA+E SY P CD+YY+CPESNTCCC+FEYG CFAWGCCPLEAATCCDD+YSCCPH+YP+C++ GTCL+SK++P V+AL+R PA P+W+ G + Sbjct: 334 NIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459
BLAST of CN188844 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.119e-42 Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = -1 Query: 339 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXPHAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 680 +GKCGIA+E SY P VCDNYY+CP+S TCCC++EYG C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP Sbjct: 331 SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444
BLAST of CN188844 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 65/122 (53.28%), Postives = 77/122 (63.11%), Query Frame = -1 Query: 315 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXPHAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 680 +G CG+A+E SY P CD Y C TCCC+ ++ SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R A+P A GN G Sbjct: 220 SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341
BLAST of CN188844 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 62/119 (52.10%), Postives = 72/119 (60.50%), Query Frame = -1 Query: 342 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXPHA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 680 TGKCGIAM ASY P VCD+ +SCP +TCCC F + N C WGCCP+E ATCC DH SCCP DYP+CN RAGTC SK++PL V+AL+RT AK Sbjct: 344 TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462
BLAST of CN188844 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 51/118 (43.22%), Postives = 61/118 (51.69%), Query Frame = -1 Query: 339 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXPHAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 680 TGKCGIAM ASY CD Y CP TCCC + N C WGCCP+E ATCC DH +CCP +YP+CN +A TC SK++P +R R P +P Sbjct: 361 TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476 The following BLAST results are available for this feature:
BLAST of CN188844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188844 ID=CN188844; Name=CN188844; organism=Citrus sinensis; type=EST; length=698bpback to top |