CX300703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA2_ARATH (Regulator of ribonuclease-like protein 2 OS=Arabidopsis thaliana GN=At5g16450 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.516e-35 Identity = 67/80 (83.75%), Postives = 75/80 (93.75%), Query Frame = 2 Query: 20 EAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 +AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP+KA+KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV Sbjct: 87 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA1_ARATH (Regulator of ribonuclease-like protein 1 OS=Arabidopsis thaliana GN=At3g02770 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.633e-34 Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 2 Query: 20 EAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 +AQNNGWAGI+VNGCIRDVDEINGCDIGVRALASHP+KA+KKG+GE+ V + I GTRI DGEWLYADTDGIL+S+ ELSV Sbjct: 87 QAQNNGWAGIIVNGCIRDVDEINGCDIGVRALASHPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA3_ARATH (Regulator of ribonuclease-like protein 3 OS=Arabidopsis thaliana GN=At5g56260 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.292e-31 Identity = 61/79 (77.22%), Postives = 71/79 (89.87%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 AQNNGW+GIVVNGC+RDVDEIN CD+GVRAL S+P+K+ KKG GEK+VP+ IGGT I DGEWLYAD+DGILIS+ ELSV Sbjct: 88 AQNNGWSGIVVNGCVRDVDEINDCDVGVRALGSNPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURM1 (Regulator of ribonuclease activity A OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=rraA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.295e-23 Identity = 45/78 (57.69%), Postives = 62/78 (79.49%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 256 A+ NGWAGIVV+GC+RD E+ C +GV ALA+HP K++K+G GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+ Sbjct: 87 AEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKSDKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEMY (Regulator of ribonuclease activity A OS=Pseudomonas mendocina (strain ymp) GN=rraA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.870e-22 Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGWAGIVV GCIRDVD I D+GV+ALASHPMK +K+GIG+ +VP+T GG GE+LYAD +GI++S LS+ Sbjct: 78 LAEKAAKNGWAGIVVYGCIRDVDVIAQADLGVQALASHPMKTDKRGIGDLNVPVTFGGVTFKPGEYLYADNNGIIVSPQALSM 160
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURPS (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei GN=rraA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.583e-21 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 241 A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 87 AEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURP6 (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei (strain 668) GN=rraA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.583e-21 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 241 A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 87 AEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURP1 (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei (strain 1710b) GN=rraA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.583e-21 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 241 A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 87 AEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURP0 (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei (strain 1106a) GN=rraA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.583e-21 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 241 A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 87 AEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURMS (Regulator of ribonuclease activity A OS=Burkholderia mallei (strain SAVP1) GN=rraA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.583e-21 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 241 A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 87 AEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159 The following BLAST results are available for this feature:
BLAST of CX300703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300703 ID=CX300703; Name=CX300703; organism=Citrus sinensis; type=EST; length=401bpback to top |