CN188831

Overview
NameCN188831
Unique NameCN188831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.799e-54
Identity = 120/216 (55.56%), Postives = 134/216 (62.04%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGK-SEPRA----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHV 688
            MD+ K+ ELK FIDQCKS+PS+L  PSLSFFRDYLESL AK+P   ++E K ++PR+                                     GD VE DNDPPQKMGDSS EVTD                +SEG  DEAIE  T AI LNP SAIMY  RASVYIK+KKPNAAIRDA AALEINPDSAKGYK+RGMA AMLG W EA  DLH+
Sbjct:    1 MDSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPTGVHEEDKDTKPRSFVVEESDDDMDETEEVKPKVEEEEEEDEIVESDVELEGDTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKSRGMARAMLGEWAEAAKDLHL 216          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A1_PONAB (Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.579e-38
Identity = 88/209 (42.11%), Postives = 119/209 (56.94%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  KV EL+ F+  CK +PSVL    + F R+++ES+  KVPP A ++ KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLEIDKEG---VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDL 205          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A1_HUMAN (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.579e-38
Identity = 88/209 (42.11%), Postives = 119/209 (56.94%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  KV EL+ F+  CK +PSVL    + F R+++ES+  KVPP A ++ KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLEIDKEG---VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDL 205          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A1_MOUSE (Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38
Identity = 87/209 (41.63%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  KV EL+ F+  C+ +PSVL    + F R+++ES+  KVPP  +K  KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL
Sbjct:    1 MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPPATHK-AKSEENTKEEKRDKTTEENIKTEELSSEESDLEIDNEG----VIEPDTDAPQEMGDENAEITEEMMDEANEKKGAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDL 204          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A1_RAT (Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38
Identity = 87/209 (41.63%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  KV EL+ F+  C+ +PSVL    + F R+++ES+  KVPP  +K  KSE                                      ++EAD D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA  DL
Sbjct:    1 MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPPATHK-AKSEENTKEEKRDKTTEDNIKTEEPSSEESDLEIDNEG----VIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAARDL 204          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A5_HUMAN (Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37
Identity = 86/209 (41.15%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  KV EL+ F+  CK +PSVL    + F R+++ES+  KVPP A ++ KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAI+D   A+EINPDSA+ YK RG AH +LGHWEEA HDL
Sbjct:    1 MDPCKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSTEESDLEIDKEG---VIEPDTDAPQEMGDENVEITEEMMDQANDKKVAAIEVLNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIQDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDL 205          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A1_CHICK (Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.663e-37
Identity = 86/216 (39.81%), Postives = 117/216 (54.17%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPP-------DAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD+ K+ EL+ F+  CK NP +L    L F R+++ES+   +PP       D   +GK+E +                                    ++E DND PQ+MGD + EVT+                +SEG L +A+ L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A++INPDSA+ YK RG AH +LGHWEEA HDL
Sbjct:    1 MDSRKLGELRAFVRLCKQNPGLLHTEELGFLREWVESMGGTIPPAPASTSTDETSKGKAEEQPEEPVKSPEPESEESDLEIDNEG-------------VIEPDNDDPQEMGDENVEVTEEMMDQANEKKMEAINALSEGDLQKAVNLFTDAIKLNPCLAILYAKRASVFVKLQKPNAAIRDCDRAIKINPDSAQTYKWRGKAHRLLGHWEEAAHDL 203          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: F10A4_HUMAN (Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35
Identity = 83/209 (39.71%), Postives = 115/209 (55.02%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  KV EL+ F+  CK +PS+L    + F R+++ES+       A ++ KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL
Sbjct:    1 MDPRKVNELRAFVKMCKKDPSILHTQEMRFLREWVESMGGT----ATQKAKSEENTKEEKPDSKVEEDLKADEPSSEESDLEIDKEG----VIEPDTDAPQEMGDENAEITEEVMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKRRGKAHRLLGHWEEAAHDL 201          
BLAST of CN188831 vs. ExPASy Swiss-Prot
Match: HRP_PLABE (58 kDa phosphoprotein OS=Plasmodium berghei PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 68/230 (29.57%), Postives = 101/230 (43.91%), Query Frame = 2
Query:   59 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPD--AYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIML--------------------NPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDL 682
            MD  K+++LK+F+  C+ NPS+L  P LSFF+D++ES   K+  D   Y++ KSE                                        E ++D P+K+     E+                  +SE +++E  +L  EA+ L                    NPSA++Y  RAS+ + +K+P A IRD T AL +N DSA  YK R  A+  LG WE A  D+
Sbjct:    1 MDIEKIEDLKKFVASCEENPSILLKPELSFFKDFIESFGGKIKKDKMGYEKMKSEDSTEEKSDEEEEDEEEEEE---------------------EEEDDDPEKL-----ELIKEEAVECPPLAPIIEGELSEEQIEEICKLKEEAVDLVENKKYEEALEKYNKIISFGNPSAMIYTKRASILLNLKRPKACIRDCTEALNLNVDSANAYKIRAKAYRYLGKWEFAHADM 204          
The following BLAST results are available for this feature:
BLAST of CN188831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
F10AL_ARATH7.799e-5455.56FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
F10A1_PONAB1.579e-3842.11Hsc70-interacting protein OS=Pongo abelii GN=ST13 ... [more]
F10A1_HUMAN1.579e-3842.11Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
F10A1_MOUSE2.693e-3841.63Hsc70-interacting protein OS=Mus musculus GN=St13 ... [more]
F10A1_RAT5.999e-3841.63Hsc70-interacting protein OS=Rattus norvegicus GN=... [more]
F10A5_HUMAN1.023e-3741.15Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV... [more]
F10A1_CHICK8.663e-3739.81Hsc70-interacting protein OS=Gallus gallus GN=ST13... [more]
F10A4_HUMAN2.134e-3539.71Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV... [more]
HRP_PLABE6.664e-2129.5758 kDa phosphoprotein OS=Plasmodium berghei PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0006N22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188831 ID=CN188831; Name=CN188831; organism=Citrus sinensis; type=EST; length=689bp
CGTTAATTACTCCGTAATCTTCGAGAAGCTAAGAACCCTTGAACGAAGGG
AGACGACGATGGACGCAGCAAAAGTGAAAGAACTGAAACAGTTCATCGAT
CAGTGCAAATCCAACCCTTCCGTTCTCGCCGACCCCTCCCTCTCCTTCTT
CCGCGACTATCTCGAAAGTCTCCATGCGAAAGTGCCTCCCGATGCGTACA
AAGAAGGCAAATCCGAACCGAGGGCCTCTGTGGTGGAGGAGAGCGAAGAG
GAAGAACAAAGGGTAGAAGTAGAAGAAAAAGAGGAAGAAGAGGATGAAAT
AGTCGAGTCCGATATTGAGCTTGAAGGAGATATTGTGGAGGCTGATAATG
ATCCTCCTCAGAAGATGGGAGACAGTTCGGCAGAAGTTACTGATGAGAAA
CGCGAAGCGGCTGCGGAGGCAAAGGCCAAGGCCATGGAAGCCATCTCTGA
AGGAAAGTTGGACGAGGCAATTGAGCTTTCGACTGAGGCTATTATGCTGA
ATCCATCAGCCATTATGTATGCAACTAGAGCCAGTGTATACATCAAAATG
AAGAAGCCTAATGCTGCCATCCGGGATGCCACTGCAGCTTTAGAGATTAA
CCCAGATTCTGCTAAGGGCTACAAGACCCGTGGCATGGCACATGCAATGC
TAGGTCACTGGGAGGAGGCTGTGCATGATCTTCATGTTG
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