CN181991

Overview
NameCN181991
Unique NameCN181991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.442e-54
Identity = 106/142 (74.65%), Postives = 117/142 (82.39%), Query Frame = 2
Query:  230 GAVHGGGTTDASAFRECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            G +HGG   D SAF+ECFSL+WKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDR T LQE IVSMAV           W ND+ GRR++IL+ADFLF +GA+IMAAAPNP  L+ GRVFVGLGVGMASMT+P
Sbjct:    4 GIIHGGA--DESAFKECFSLTWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAP 143          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 87/141 (61.70%), Postives = 105/141 (74.47%), Query Frame = 2
Query:  236 VHGG-GTTDASAFRECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            V GG    D + F EC+  +WK PY++RLA SAGIGGLLFGYDTGVISGALL+I++DF  VD+KT LQ +IVSMAV           W+ND+FGRR SIL+AD LF +GA++MA AP P  +I GR+FVG GVGMASMTSP
Sbjct:    2 VEGGIAKADKTEFTECWRTTWKTPYIMRLALSAGIGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIVSMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSP 142          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36
Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 2
Query:  275 ECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            E ++ +W+ PY++RLA SAGIGGLLFGY+TGVI+GALLYI+++F  VD KT LQE IVSM V           W ND+FGRR S+L+AD LF +GA++M  A  P  +I GR+ VG GVGMASMTSP
Sbjct:   15 EVWTTTWETPYIMRLALSAGIGGLLFGYNTGVIAGALLYIKEEFGEVDNKTWLQEIIVSMTVAGAIVGAAIGGWYNDKFGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSP 141          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33
Identity = 69/119 (57.98%), Postives = 90/119 (75.63%), Query Frame = 2
Query:  299 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            N Y+L L  +AGIGGLLFGYDTGVISGALLYI+DDF+ V + + LQE+IVSMA+           W+ND +GR+ + L AD +F  GA++MAAAP+P  LI+GR+ VGLGVG+AS+T+P
Sbjct:   28 NSYILGLTVTAGIGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAP 146          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  242 GGGTTDAS-AFRECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            GGG  D   A R  F       +V  +A  + +GG LFGYDTGV+SGA+L ++   + +    L QE +VS  V            +N  FGRR +IL+A  LF  G+ ++AAA N   L+ GR+ VGLG+G+ASMT P
Sbjct:   39 GGGVGDLERAARRQFQQDETPAFVYVVAVFSALGGFLFGYDTGVVSGAMLLLK---RQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVP 174          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: MYCT_RAT (Proton myo-inositol cotransporter OS=Rattus norvegicus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18
Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  218 LKMEGAVHGGGTTDASAFRECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            L  E A    G     A R  F       +V   A  + +GG LFGYDTGV+SGA+L +R   + +    + QE +VS AV            +N   GRR++IL+A  L  VG+ ++AAA N   L+ GR+ VGLG+G+ASMT P
Sbjct:   21 LAAESAASLQGAELERAARRQFQRDETPAFVYAAAAFSALGGFLFGYDTGVVSGAMLLLR---RQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVP 163          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18
Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  218 LKMEGAVHGGGTTDASAFRECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            L  E A    G     A R  F       +V   A  + +GG LFGYDTGV+SGA+L +R   + +    + QE +VS AV            +N   GRR++IL+A  L  VG+ ++AAA N   L+ GR+ VGLG+G+ASMT P
Sbjct:   21 LAAESAASLQGAELERAARRQFQRDETPAFVYAAAAFSALGGFLFGYDTGVVSGAMLLLR---RQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVP 163          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            + F A + GLLFG D GVI+GAL +I D+F+        QE +VS  +           W++ + GR+ S+++   LF  G++  AAAPN   LI  RV +GL VG+AS T+P
Sbjct:   18 VCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHT---QEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAP 127          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            + F A + GLLFG D GVI+GAL +I D+F+        QE +VS  +           W++ + GR+ S+++   LF  G++  AAAPN   LI  RV +GL VG+AS T+P
Sbjct:   18 VCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHT---QEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAP 127          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: GTR1_LEIDO (Membrane transporter D1 OS=Leishmania donovani PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15
Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  329 AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            A +GG LFGYDTGVI+ AL  ++D F      +     IV++A+           +++  FGRR  I VAD LF +G+V+M AAPN   ++  RV VGL +G++S T P
Sbjct:    9 AALGGFLFGYDTGVINAALFQMKDHF-GFSEHSWQYALIVAIAIAGAFVGAFISGFISAAFGRRPCIAVADALFVIGSVLMGAAPNVEVVLVSRVIVGLAIGISSATIP 116          
The following BLAST results are available for this feature:
BLAST of CN181991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
INT2_ARATH1.442e-5474.65Probable inositol transporter 2 OS=Arabidopsis tha... [more]
INT4_ARATH2.308e-4461.70Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
INT3_ARATH1.038e-3658.27Probable inositol transporter 3 OS=Arabidopsis tha... [more]
INT1_ARATH4.083e-3357.98Probable inositol transporter 1 OS=Arabidopsis tha... [more]
MYCT_HUMAN2.569e-1941.01Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
MYCT_RAT8.264e-1839.04Proton myo-inositol cotransporter OS=Rattus norveg... [more]
MYCT_MOUSE8.264e-1839.04Proton myo-inositol cotransporter OS=Mus musculus ... [more]
GALP_ECOLI7.735e-1639.82Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL67.735e-1639.82Galactose-proton symporter OS=Escherichia coli O6 ... [more]
GTR1_LEIDO1.010e-1541.28Membrane transporter D1 OS=Leishmania donovani PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181991 ID=CN181991; Name=CN181991; organism=Citrus sinensis; type=EST; length=656bp
GAGGCTTTCCTTCACTCACTTTCTTTCTCCCCCACCCCCAGTCCATTTTC
CCGGAAAATTTACTCACTATCACTATCATCATCATCACTCCCTTATATAG
TTATTTATAGTCCAAGTCCAACCACACCAAACCATTTTCTTGCCAAAATA
AAGAAAACAAACTCCTAAATTGTATATCTTTTAACAGATATTAATTTGTA
AAAAAAAAAAAAAAGGCCTGAAAATGGAGGGAGCAGTACATGGAGGAGGG
ACGACAGATGCGTCAGCGTTTCGAGAATGCTTCTCTTTGTCTTGGAAAAA
TCCCTACGTTCTTCGACTTGCTTTCTCTGCTGGAATTGGCGGCCTTCTCT
TTGGCTACGACACTGGAGTCATATCAGGCGCGCTACTTTATATCAGAGAT
GACTTCAAATCCGTCGATAGAAAGACTTTACTGCAGGAAAGCATAGTTAG
CATGGCTGTTGCTGGAGCAATCATTGGAGCTGCAATCGGTGGATGGATGA
ATGATCGCTTTGGAAGGAGAACTTCAATCCTTGTTGCAGATTTCCTGTTC
TTCGTTGGTGCTGTGATCATGGCTGCTGCTCCTAACCCTGGTGCCCTTAT
CACTGGACGAGTATTTGTAGGACTTGGTGTGGGAATGGCATCAATGACAT
CCCCGC
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