CN181941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181941 vs. ExPASy Swiss-Prot
Match: CAF1B_HUMAN (Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.109e-28 Identity = 59/129 (45.74%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 19 ISSTSESINSAYLFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSTG--FFKLPYRLVFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSKNARYLALSSQDGYCTLVEFENDELGMPI 399 + S +N+ Y+FSRK+L RP LP K +AVR CP+ F LR TG LPYRLVFA+A+ +S+ +YDT+ P ++ +HY ++DI+WS + +LA+SS DGYC+ V FE DELG+P+ Sbjct: 256 VESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFELRPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPL 384
BLAST of CN181941 vs. ExPASy Swiss-Prot
Match: CAF1B_CHICK (Chromatin assembly factor 1 subunit B OS=Gallus gallus GN=CHAF1B PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 1 Query: 19 ISSTSESINSAYLFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRES---------NSTGFFKLPYRLVFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSKNARYLALSSQDGYCTLVEFENDELGMPI 399 + S N+ Y+FSR +L RP LP K +AVR CP+ F LR++ +S LPYRLVFA+A+ +S+ YDTE P ++ +HY ++DI+WS + +LA+SS DGYC+ V FE DELG+P+ Sbjct: 256 VESGENVTNTTYVFSRNNLKRPMGHLPCPGKATLAVRCCPVYFELRQALNKGEVSQKSSPALLNLPYRLVFAVASEDSVLFYDTEQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPL 391
BLAST of CN181941 vs. ExPASy Swiss-Prot
Match: CAF1B_MOUSE (Chromatin assembly factor 1 subunit B OS=Mus musculus GN=Chaf1b PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.483e-26 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 43 NSAYLFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLR---------ESNSTGFFKLPYRLVFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSKNARYLALSSQDGYCTLVEFENDELGMPI 399 N+ Y+FSRK L RP LP K +AVR CP+ F LR E S LPYR+VFA+A+ +S+ +YDT+ P ++ +HY ++DI+WS + +LA+SS DGYCT V FE ELG+P+ Sbjct: 264 NTTYVFSRKHLKRPIAHLPCPGKATLAVRCCPVYFELRPVAETEKASEEPSPELVNLPYRMVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCTFVTFEKGELGIPL 391
BLAST of CN181941 vs. ExPASy Swiss-Prot
Match: YEG3_SCHPO (Uncharacterized WD repeat-containing protein C26H5.03 OS=Schizosaccharomyces pombe GN=SPAC26H5.03 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 55/145 (37.93%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 46 SAYLFSRKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSTGF----FKLPYRLVFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSKNARYLALSSQDGYCTLVEFENDELGMPISLSGNKVSKDENKSPLLTKSED 465 +AY+++R +++ P L G KPV+AVRF P+ + L ++ F F LPYR+VFA+A +++YIYDT++ P LHY+ +TDIAW+ + L ++S DG+C+++ FE ELG+ S +K+S E +S + +D Sbjct: 335 TAYIYTRGSITKQPVACLNGFKKPVIAVRFSPIHYELNSFSNFSFTSVSFNLPYRMVFAVACQDAVYIYDTQTCKPFYRAVNLHYSNLTDIAWNDDGNVLLMTSIDGFCSVITFEPGELGVK---SQHKISLPEKRSASPSSIDD 476
BLAST of CN181941 vs. ExPASy Swiss-Prot
Match: CAC2_YEAST (Chromatin assembly factor 1 subunit p60 OS=Saccharomyces cerevisiae GN=CAC2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20 Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 4 AGSYKISSTSESINSAYLFSRKDL--------SRPALQLPGASKPVVAVRFCPLAFNLRESNSTGFFKLPYRLVFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSKNARYLALSSQDGYCTLVEFEND 381 +G YK++ E N Y+++R + +RPA+++P KP + F P+ + E+ KLPY+LVFAIAT N + +YDT+ + P+ ++ +HY+ ITD+AWS++ L +SS DG+C+ V + + Sbjct: 276 SGVYKVAG-DEVANCVYVYTRSGILNSAGGVKNRPAIRIPSLKKPALMAAFSPVFY---ETCQKSVLKLPYKLVFAIATTNEVLVYDTDVLEPLCVVGNIHYSPITDLAWSEDGSTLLISSTDGFCSYVSIDTE 405 The following BLAST results are available for this feature:
BLAST of CN181941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181941 ID=CN181941; Name=CN181941; organism=Citrus sinensis; type=EST; length=582bpback to top |