CN188800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: Y1390_ARATH (Uncharacterized protein At1g03900 OS=Arabidopsis thaliana GN=At1g03900 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 69/145 (47.59%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 257 ENEETEAIEFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGEL-HPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKKKTAEEME 688 E EE E E L V E VY IPPR ++ Y+ EW + W G L+VVS + C I+LED ++G+L+A F+ G + VEP +DSSRYFVLRI++ GR ++AFIG+GF ER EA+DF AL DH KY+ ++K E E Sbjct: 5 EEEEEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDRCEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDD---GRGKYAFIGLGFAERNEAFDFNVALSDHEKYVRREKEKETGE 146
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP2_RAT (Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus GN=Necap2 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 2 Query: 263 EETEAIEFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKK 667 EE+E E VL E +VY IPPR + YRA EW +++ +W G L++ +KG+ IKLED+++GEL+A+A + + VE V DSSRYFV+RIE+ G R AFIGIGF +R +A+DF AL DH K++ ++ Sbjct: 2 EESE-YESVLCVKPEVHVYRIPPRATNRGYRASEWQLDQPSWSGRLRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQ 132
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP2_MOUSE (Adaptin ear-binding coat-associated protein 2 OS=Mus musculus GN=Necap2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 2 Query: 263 EETEAIEFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKK 667 EE+E E VL E +VY IPPR + YRA EW +++ +W G L++ +KG+ IKLED+++GEL+A+A + + VE V DSSRYFV+RIE+ G R AFIG+GF +R +A+DF AL DH K++ ++ Sbjct: 2 EESE-YESVLCVKPEVHVYRIPPRATNRGYRASEWQLDQPSWSGRLRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGLGFGDRGDAFDFNVALQDHFKWVKQQ 132
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP2_HUMAN (Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens GN=NECAP2 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 61/134 (45.52%), Postives = 88/134 (65.67%), Query Frame = 2 Query: 266 ETEAIEFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKK 667 E E VL + +VY IPPR + YRA EW +++ +W G L++ +KG+ IKLED+++GEL+A+A + + VE V DSSRYFV+RIE+ G R AFIGIGF +R +A+DF AL DH K++ ++ Sbjct: 2 EESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQ 132
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP2_BOVIN (Adaptin ear-binding coat-associated protein 2 OS=Bos taurus GN=NECAP2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26 Identity = 63/135 (46.67%), Postives = 90/135 (66.67%), Query Frame = 2 Query: 263 EETEAIEFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKK 667 EE E E VL + +VY IPPR + YRA EW +++ +W G L++ +KG+ IKLED+++GEL+A+A + + VE V DSSRYFV+RIE+ G R AFIGIGF +R +A+DF AL DH K++ ++ Sbjct: 2 EEAE-YESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQ 132
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP1_BOVIN (Adaptin ear-binding coat-associated protein 1 OS=Bos taurus GN=NECAP1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26 Identity = 62/141 (43.97%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 281 EFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKKKTAEEMEQQFQS 703 E VL + VY IPPR S YRA +W +++ W G L++ SKG+ IKLEDK +GEL+A+A + + VE V DSSRYFV+RI++ G R AFIGIGF +R +A+DF +L DH K++ ++ + Q+ S Sbjct: 8 ESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKVAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFSDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDS 145
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP1_RAT (Adaptin ear-binding coat-associated protein 1 OS=Rattus norvegicus GN=Necap1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25 Identity = 62/141 (43.97%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 281 EFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKKKTAEEMEQQFQS 703 E VL + VY IPPR S YRA +W +++ W G L++ SKG+ IKLEDK +GEL+A+A + + VE V DSSRYFV+RI++ G R AFIGIGF +R +A+DF +L DH K++ ++ + Q+ S Sbjct: 8 ESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVADSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDS 145
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP1_PONAB (Adaptin ear-binding coat-associated protein 1 OS=Pongo abelii GN=NECAP1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25 Identity = 61/141 (43.26%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 281 EFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKKKTAEEMEQQFQS 703 E VL + VY IPPR S YRA +W +++ W G L++ SKG+ IKLEDK +GEL+A+A + + VE V DSSRYFV+RI++ G R AFIGIGF +R +A+DF +L DH K++ ++ + Q+ + Sbjct: 8 ESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDA 145
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP1_HUMAN (Adaptin ear-binding coat-associated protein 1 OS=Homo sapiens GN=NECAP1 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25 Identity = 61/141 (43.26%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 281 EFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKKKTAEEMEQQFQS 703 E VL + VY IPPR S YRA +W +++ W G L++ SKG+ IKLEDK +GEL+A+A + + VE V DSSRYFV+RI++ G R AFIGIGF +R +A+DF +L DH K++ ++ + Q+ + Sbjct: 8 ESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDA 145
BLAST of CN188800 vs. ExPASy Swiss-Prot
Match: NECP1_MOUSE (Adaptin ear-binding coat-associated protein 1 OS=Mus musculus GN=Necap1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 281 EFVLFQVSECYVYLIPPRKSAASYRADEWNVNKWAWEGMLKVVSKGEECIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVLRIEENIGGRLRHAFIGIGFRERTEAYDFQAALHDHMKYLDKK----KTAEEMEQQ 694 E VL + VY IPPR S YRA +W +++ W G L++ SKG+ IKLEDK +GEL+A+A + + VE V DSSRYFV+RI++ G R AFIGIGF +R +A+DF +L DH K++ ++ K ++EM+ + Sbjct: 8 ESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDNR 146 The following BLAST results are available for this feature:
BLAST of CN188800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188800 ID=CN188800; Name=CN188800; organism=Citrus sinensis; type=EST; length=710bpback to top |