CN188794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188794 vs. ExPASy Swiss-Prot
Match: Y3236_ARATH (Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.174e-78 Identity = 159/222 (71.62%), Postives = 168/222 (75.68%), Query Frame = 2 Query: 17 RKKXXEIVTE*LSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVHTQLEQTRRTNKNVHNISKELRKLHREGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKRVAEVINKLMWLASVCTSVAFIASSYIVVGRRHEWAAIL 682 RKK EIV LSLPDTN N LTRDHKTALDIAEGLP SEE+S IK+CLAR GA+RANELNQPRDELR TVTQIK DVH QLEQT+RTNKNVHNISKELRKLHREGI RASFKIFFIFNA+ALFTSLAVVVVQITLVRGETKAEKRV EVINKLMWLAS+CTSVAF+ASSYIVVGR++EWAA L Sbjct: 309 RKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSEESSYIKECLARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASMCTSVAFLASSYIVVGRKNEWAAEL 530
BLAST of CN188794 vs. ExPASy Swiss-Prot
Match: Y2168_ARATH (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31 Identity = 82/227 (36.12%), Postives = 117/227 (51.54%), Query Frame = 2 Query: 17 RKKXXEIVTE*LSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDE--LRKTVTQIKKDVHTQLEQTRRTNKNVHNISKELRKLHREGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR----RASFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKRVAEVINKLMWLASVCTSVAFIASSYIVVGRRHEWAAI 679 RK +I + L+ VNA+ +TA+D+A+ L SE A EI + L GA + + + L++ V+ IK +V +QL Q +TN+ V I+KELRKLHRE + R F++F + NA +LF SLAVVVVQITLV +T+A+K+V V+NKLMW A CT AF+A ++ VVG+ + W AI Sbjct: 239 RKARPQITSLLLTFTAIEVNAINNQKETAMDLADKLQYSESALEINEALVEAGAKHGRFIGREDEARALKRAVSDIKHEVQSQLLQNEKTNRRVSGIAKELRKLHREAVQNTTNSITVVAVLFASIAFLAIFNLPGQYFTEGSHVGQANIAGRTGFRVFCLLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVNKLMWAACACTFGAFLAIAFAVVGKGNSWMAI 465
BLAST of CN188794 vs. ExPASy Swiss-Prot
Match: Y5262_ARATH (Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 75/239 (31.38%), Postives = 113/239 (47.28%), Query Frame = 2 Query: 17 RKKXXEIVTE*LSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRD--------ELRKTVTQIKKDVHTQLEQTRRTNKNVHNISKELRKLHREG----------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKRVAEVINKLMWLASVCTSVAFIASSYIVVGRRHEWAAI 679 RK EIV L + + A+ + +TALDIAE EI L + G A + +L++TV++I +VHTQLEQT RT + + I+K + K+H EG + R F IF +F++ ALF SLAVVVVQ ++V E +A+K++ +INKLMW+A + SVAF++ S++VVG + + A+ Sbjct: 236 RKNRAEIVQTVLKYCEVSRVAVNKSGETALDIAE----KTGLHEIVPLLQKIGMQNARSIKPAEKVEPSGSSRKLKETVSEIGHEVHTQLEQTGRTRREIQGIAKRVNKMHTEGLNNAINSTTLVAILIATVAFAAIFNVPGQYTDDPKDVPPGYSLGEARAAPRPEFLIFVVFDSFALFISLAVVVVQTSVVVIERRAKKQMMAIINKLMWMACIMISVAFVSLSFVVVGEKEKPLAV 470 The following BLAST results are available for this feature:
BLAST of CN188794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188794 ID=CN188794; Name=CN188794; organism=Citrus sinensis; type=EST; length=683bpback to top |