CN181897

Overview
NameCN181897
Unique NameCN181897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.525e-24
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            H+A AY HLMNEED ENLKWL +FNKYDLYSKSKV V+VEKVKPYY+SLI+KYFPE LRW
Sbjct:  255 HKAGAYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314          
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.910e-24
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            H+++AYKHLMN ED EN+KWLK+FNKYDLYSKSKVRV+VE+VKPYYLSL  KYFP KL+W
Sbjct:  252 HKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311          
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.008e-23
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            H A  Y HLMNEED ENLKWL +FNKYDLYSKSKV VDVEKVKPYY+SLI+KYFPE LRW
Sbjct:  258 HTAGEYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317          
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.720e-23
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            H+  AY HLMN+ED ENLKWL++FNKYDLYSKS  R+DVEKVKPYY+SLIEKYFP KLRW
Sbjct:  249 HKHGAYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308          
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.235e-22
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            H+A AY HLMN+ED ++LKWL +FNKYDLYSKSKV VDVE+VKPYY+SLI KYFP KL+W
Sbjct:  258 HKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317          
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-16
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            HR + Y HL NEED + L W+K FNK+DLYSK    VDVE +KPYY SLI KYFP +L W
Sbjct:  233 HRHNKYTHLTNEEDEKMLNWVKEFNKFDLYSKDSEPVDVESLKPYYQSLISKYFPNELHW 292          
BLAST of CN181897 vs. ExPASy Swiss-Prot
Match: MIOX_DANRE (Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = -2
Query:  181 HRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 360
            H    Y HL NE+D + L W+K FNK+DLY+KS    DVE++KPYY SLI+KY P  L+W
Sbjct:  219 HSNGDYMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW 278          
The following BLAST results are available for this feature:
BLAST of CN181897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MIOX5_ARATH4.525e-2481.67Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX1_ARATH5.910e-2478.33Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH1.008e-2381.67Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ1.720e-2378.33Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX2_ARATH4.235e-2275.00Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI5.924e-1661.67Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_DANRE8.006e-1355.00Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181897 ID=CN181897; Name=CN181897; organism=Citrus sinensis; type=EST; length=361bp
TTTTGAAAAGAAATCACTTGATAGATTACATTACAAACTTATTGAAGTAG
AAACGAAGTTATTAAGTAACCCAGTCAGCATGTCTAATCCAACCCTGCCC
CAAAATAGAGATAGTCATCTATGCAATATTGCTTGCTGCATTCTGTTGAA
CATCAAGCTGTTTTCGAGCCCCAAATTTCACCATCTCAGCTTTTCCGGAA
AGTACTTTTCAATGAGACTGAGATAATATGGCTTGACTTTCTCGACATCA
ACTCGAACTTTGCTCTTGCTGTAGAGGTCATACTTGTTGAATATTTTAAG
CCACTTCAGATTCTCAATATCTTCCTCATTCATCAAGTGCTTATATGCAT
CTGCCCGGTGT
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