CN188779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.073e-19 Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = -1 Query: 324 MSDTCGNCDCADRSQCVKKASSYAADFVETD 416 MSDTCGNCDCAD++QCVKK SSY AD +ET+ Sbjct: 1 MSDTCGNCDCADKTQCVKKGSSYTADIIETE 31 HSP 2 Score: 54.6842 bits (130), Expect = 4.073e-19 Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = -2 Query: 218 VVMDVQAAETEGNCKCGPTCACVNCTCG 301 VVMD AAE +G CKCGP+C+C NCTCG Sbjct: 37 VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 9.324e-14 Identity = 23/31 (74.19%), Postives = 24/31 (77.42%), Query Frame = -1 Query: 324 MSDTCGNCDCADRSQCVKKASSYAADFVETD 416 MSD CGNCDCAD SQCVKK +S D VETD Sbjct: 1 MSDKCGNCDCADSSQCVKKGNS--IDIVETD 29 HSP 2 Score: 47.7506 bits (112), Expect = 9.324e-14 Identity = 19/27 (70.37%), Postives = 21/27 (77.78%), Query Frame = -2 Query: 221 VVMDVQAAETEGNCKCGPTCACVNCTC 301 VVM V AAE+ G CKCG +C CVNCTC Sbjct: 36 VVMGVPAAESGGKCKCGTSCPCVNCTC 62
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 1.575e-13 Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = -1 Query: 324 TCGNCDCADRSQCVKKASSYAADFVETD 407 TCGNCDC D+SQCVKK +SY D VET+ Sbjct: 3 TCGNCDCVDKSQCVKKGNSYGIDIVETE 30 HSP 2 Score: 44.669 bits (104), Expect = 1.575e-13 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 215 SFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 319 S+V V+V +AAE +G CKCG CAC +C CG+ Sbjct: 32 SYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 2.161e-12 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = -2 Query: 221 VVMDVQAAETEGNCKCGPTCACVNCTC 301 V+MD AAE GNCKCGP+CACV+C C Sbjct: 38 VIMDAPAAENGGNCKCGPSCACVDCKC 64 HSP 2 Score: 41.5874 bits (96), Expect = 2.161e-12 Identity = 17/31 (54.84%), Postives = 20/31 (64.52%), Query Frame = -1 Query: 324 MSDTCGNCDCADRSQCVKKASSYAADFVETD 416 MS C NCDC+D SQC KK S+ VET+ Sbjct: 1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETE 31
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 4.739e-12 Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = -1 Query: 324 MSDTCGNCDCADRSQCVKKASSYAADFVETD 416 MSD CGNCDCAD+SQCVKK +SY VE + Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAE 31 HSP 2 Score: 39.6614 bits (91), Expect = 4.739e-12 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = -2 Query: 218 DVQAAETEGNCKCGPTCACVNCTCG 292 +V A E G CKCG +C+C +C CG Sbjct: 37 EVAAGEENGGCKCGTSCSCTDCKCG 61
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 4.739e-12 Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = -1 Query: 324 MSDTCGNCDCADRSQCVKKASSYAADFVETD 416 MSD CGNCDCAD+SQCVKK +SY VE + Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAE 31 HSP 2 Score: 39.6614 bits (91), Expect = 4.739e-12 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = -2 Query: 218 DVQAAETEGNCKCGPTCACVNCTCG 292 +V A E G CKCG +C+C +C CG Sbjct: 37 EVAAGEENGGCKCGTSCSCTDCKCG 61
BLAST of CN188779 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 7.998e-12 Identity = 17/28 (60.71%), Postives = 21/28 (75.00%), Query Frame = -2 Query: 218 VVMDVQAAETEGNCKCGPTCACVNCTCG 301 V +D AAE +G CKCG C+CV+CTCG Sbjct: 38 VFVDAPAAEHDGKCKCGTGCSCVSCTCG 65 HSP 2 Score: 45.0542 bits (105), Expect = 7.998e-12 Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = -1 Query: 324 MSDTCGNCDCADRSQCVKKASSYAADFVETD 416 MS C NCDCAD +QCVKK +SY VET+ Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETE 31 The following BLAST results are available for this feature:
BLAST of CN188779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188779 ID=CN188779; Name=CN188779; organism=Citrus sinensis; type=EST; length=488bpback to top |