CN188762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.019e-53 Identity = 93/162 (57.41%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 209.92 bits (533), Expect = 1.019e-53 Identity = 93/162 (57.41%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53 Identity = 92/162 (56.79%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIW+E N W ++H H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN-GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.623e-53 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 3 Query: 168 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSDG IS+ T T G W+ +I+ AH +G +VSWAPA+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.923e-50 Identity = 91/167 (54.49%), Postives = 113/167 (67.66%), Query Frame = 3 Query: 153 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 M Q +++GHED VHD D+YGK LAT SSD IKI + QHL L+GH GPVWQVAWAHPKFG ILAS SYD +VI+WKE N W+ H + H+ SVNSI+WAPHE GLSLAC SSDG++++ + W+ + Q +GV SVSW+PA P +LV Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLV 166
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.429e-49 Identity = 99/188 (52.66%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 162 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-------------GNQN----------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 + IET HED VHD +DFYGKRLAT SSD ++K+ + N A TL GH+GPVWQVAWAHP FG ILASCSYDG+V+IWK+ G+Q+ WT+ H +SVNSI+WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAPA+ PG+L+ Sbjct: 19 KNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTLHTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLI 205
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_ASPTN (Protein transport protein sec13 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec13 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.206e-46 Identity = 89/168 (52.98%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 174 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 +GHED +HD +D+YG+RLAT SSD +IK+ + A + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN WT+ F+ H +SVN ++WAPHE G L C SSDG++SV D W T +I AH +GV S+SWAPA APG+L+ Sbjct: 10 SGHEDMIHDAGLDYYGRRLATCSSDKTIKVFEIEGEAHRLVETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNTTSPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLGCASSDGHVSVL-EFQDNSW-THQIFHAHGMGVNSISWAPAAAPGSLI 175
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.575e-46 Identity = 89/165 (53.94%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 174 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-----NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 +GH+D +HD MD+YG+RLAT SSD +IKI L + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E + + W++ F+ H +SVN ++WAPHELG LAC SSDG++SV D W T +I AH +GV SVSWAPA APG+++ Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSVSWAPAAAPGSVI 170
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46 Identity = 89/168 (52.98%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 174 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 +GH+D +HD +D+YG+RLAT SSD +IKI + + + TLKGH GPVW V WAHPKFG+ILAS SYDG+V+IW+E +Q+ WT+ F+ H +SVN I+WAPHE G LAC SSDG++SV D W T +I AH +GV S+SWAPA +PG+LV Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAPAASPGSLV 175
BLAST of CN188762 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46 Identity = 92/176 (52.27%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 153 MPAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 653 M AQ I +GH++ +HD +D+YG+RLAT SSD +IKI + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN WT+ F+ H +SVN ++WAPHE G LAC SSDG++SV D W T +I AH +GV S+SWAPA APG+L+ Sbjct: 1 MAAQVISNSGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAPAAAPGSLI 174 The following BLAST results are available for this feature:
BLAST of CN188762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188762 ID=CN188762; Name=CN188762; organism=Citrus sinensis; type=EST; length=691bpback to top |